RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ZC3H12AQ5D1E8 599 aaKnown RBP17.68■□□□□ 0.42
CCDC9-202ENST00000595659 HJURPQ8NCD3 748 aaPredicted RBP17.68■□□□□ 0.42
CCDC9-202ENST00000595659 CADM4Q8NFZ8 388 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 DNASE2BQ8WZ79 361 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SNX19Q92543 992 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SLC39A13Q96H72 371 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SCNM1Q9BWG6 230 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 LHX5Q9H2C1 402 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 TJP2Q9UDY2 1190 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SUSD2Q9UGT4 822 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 EIF2B4Q9UI10 523 aaKnown RBP17.68■□□□□ 0.42
CCDC9-202ENST00000595659 RWDD2AQ9UIY3 292 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 SLCO1B1Q9Y6L6 691 aa17.68■□□□□ 0.42
CCDC9-202ENST00000595659 CNOT1A5YKK6 2376 aaKnown RBP17.67■□□□□ 0.42
CCDC9-202ENST00000595659 A0A1B0GTW7 788 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 BECN2A8MW95 431 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 IRAK2O43187 625 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 MED7O43513 233 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 SH3BP5O60239 455 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 ACSL1P33121 698 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 ACADSBP45954 432 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 FSCBQ5H9T9 825 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 MS4A13Q5J8X5 152 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 PASD1Q8IV76 773 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 AZIN2Q96A70 460 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 LMLNQ96KR4 655 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 SERPINB11Q96P15 392 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 C6orf106Q9H6K1 298 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-202ENST00000595659 IL21RQ9HBE5 538 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 DNAAF2Q9NVR5 837 aaKnown RBP17.67■□□□□ 0.42
CCDC9-202ENST00000595659 TLR6Q9Y2C9 796 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 ACACBO00763 2458 aa17.67■□□□□ 0.42
CCDC9-202ENST00000595659 TPRP12270 2363 aaKnown RBP17.67■□□□□ 0.42
CCDC9-202ENST00000595659 BCAT2O15382 392 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 SART1O43290 800 aaKnown RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 HYAL3O43820 417 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 IGLV3-19P01714 112 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 CSKP41240 450 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 RPS14P62263 151 aaKnown RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 MPP7Q5T2T1 576 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 RAP1GAP2Q684P5 730 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 GBP6Q6ZN66 633 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 IRF2BP1Q8IU81 584 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 LGI2Q8N0V4 545 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 FIBINQ8TAL6 211 aa17.66■□□□□ 0.42
CCDC9-202ENST00000595659 DDX50Q9BQ39 737 aaKnown RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 AJAP1Q9UKB5 411 aaPredicted RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 INTS6Q9UL03 887 aaKnown RBP17.66■□□□□ 0.42
CCDC9-202ENST00000595659 SYNJ2BP-COX16A0A087WUM0 186 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 TYW5A2RUC4 315 aaKnown RBP17.65■□□□□ 0.42
CCDC9-202ENST00000595659 UPK3BL1B0FP48 263 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 UPK3BL2E5RIL1 263 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 CTSOP43234 321 aaPredicted RBP17.65■□□□□ 0.42
CCDC9-202ENST00000595659 UBE2HP62256 183 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 PDCLQ13371 301 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 CDH18Q13634 790 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 UNQ6494/PRO21346Q6UXR6 183 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 ENOSF1Q7L5Y1 443 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 CHSY1Q86X52 802 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 DHX40Q8IX18 779 aaKnown RBP17.65■□□□□ 0.42
CCDC9-202ENST00000595659 WDTC1Q8N5D0 677 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 STK32AQ8WU08 396 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 MYO19Q96H55 970 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 POPDC2Q9HBU9 364 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 COX16Q9P0S2 106 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 GON4LQ3T8J9 2241 aa17.65■□□□□ 0.42
CCDC9-202ENST00000595659 TNRC6BQ9UPQ9 1833 aaKnown RBP17.65■□□□□ 0.42
CCDC9-202ENST00000595659 A0A1B0GVT2 93 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 FAM170AA1A519 330 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 H0Y626 953 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 GJB3O75712 270 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 GRAP2O75791 330 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 LUC7L3O95232 432 aaKnown RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 TRUB2O95900 331 aaKnown RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 APOEP02649 317 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 DNTTP04053 509 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 PROS1P07225 676 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 PON1P27169 355 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 MTIF2P46199 727 aaKnown RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 CSNK1EP49674 416 aaKnown RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 YWHAZP63104 245 aaKnown RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 BNC1Q01954 994 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 NNTQ13423 1086 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 EXOC3L4Q17RC7 722 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 PITRM1Q5JRX3 1037 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 CIR1Q86X95 450 aaPredicted RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 CCDC117Q8IWD4 279 aaPredicted RBP17.64■□□□□ 0.41
CCDC9-202ENST00000595659 GANCQ8TET4 914 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 TTC17Q96AE7 1141 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 ADAM33Q9BZ11 813 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 THAP9Q9H5L6 903 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 APEX2Q9UBZ4 518 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 SUN2Q9UH99 717 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 PLXND1Q9Y4D7 1925 aa17.64■□□□□ 0.41
CCDC9-202ENST00000595659 EPG5Q9HCE0 2579 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms