RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 COQ4Q9Y3A0 265 aa18.19■□□□□ 0.5
RETREG3-212ENST00000593251 GABBR2O75899 941 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 LATS1O95835 1130 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 CALCAP01258 141 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 DLDP09622 509 aaKnown RBP18.18■□□□□ 0.5
RETREG3-212ENST00000593251 VDRP11473 427 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 POLR2EP19388 210 aaKnown RBP18.18■□□□□ 0.5
RETREG3-212ENST00000593251 PRCPP42785 496 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 GRIA4P48058 902 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 ZNF445P59923 1031 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 IL9RQ01113 521 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 SUZ12Q15022 739 aaKnown RBP18.18■□□□□ 0.5
RETREG3-212ENST00000593251 PIK3R6Q5UE93 754 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 PDZD3Q86UT5 571 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 UBR7Q8N806 425 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 CLEC4CQ8WTT0 213 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 HNRNPLLQ8WVV9 542 aaKnown RBP18.18■□□□□ 0.5
RETREG3-212ENST00000593251 KCTD13Q8WZ19 329 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 TFAP2BQ92481 460 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 GDPD2Q9HCC8 539 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 CNGB3Q9NQW8 809 aa18.18■□□□□ 0.5
RETREG3-212ENST00000593251 APC2O95996 2303 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 A0A1W2PQ27 194 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 A0A1W2PQ64 194 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 H0Y8X5 98 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 DKK1O94907 266 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 ATP5BP06576 529 aaKnown RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 SETSIPP0DME0 302 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 CD27P26842 260 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 PMS1P54277 932 aaKnown RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 YWHAEP62258 255 aaKnown RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 FAM133BQ5BKY9 247 aaKnown RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 ZNF776Q68DI1 518 aaPredicted RBP18.17■□□□□ 0.5
RETREG3-212ENST00000593251 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 PMF1Q6P1K2 205 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 MSANTD2Q6P1R3 559 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 GANCQ8TET4 914 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 MYEOVQ96EZ4 313 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 MYO19Q96H55 970 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 FBRSQ9HAH7 460 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 OSGEPQ9NPF4 335 aa18.17■□□□□ 0.5
RETREG3-212ENST00000593251 FASNP49327 2511 aaKnown RBP18.16■□□□□ 0.5
RETREG3-212ENST00000593251 TRIM49BA6NDI0 452 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 FAM47DPA6NHR8 397 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 SLC16A3O15427 465 aaKnown RBP18.16■□□□□ 0.5
RETREG3-212ENST00000593251 ACSL4O60488 711 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 IGLV3-27P01718 113 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 C7P10643 843 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 CCT8P50990 548 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 ZBTB16Q05516 673 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 NADSYN1Q6IA69 706 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 TMEM270Q6UE05 265 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 LCLAT1Q6UWP7 414 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 ADAT2Q7Z6V5 191 aaKnown RBP18.16■□□□□ 0.5
RETREG3-212ENST00000593251 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 SCML4Q8N228 414 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 IGSF8Q969P0 613 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 PRICKLE1Q96MT3 831 aaPredicted RBP18.16■□□□□ 0.5
RETREG3-212ENST00000593251 TSG101Q99816 390 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 ZSWIM1Q9BR11 485 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 ORAI3Q9BRQ5 295 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 SGK2Q9HBY8 427 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 SERGEFQ9UGK8 458 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 SUN2Q9UH99 717 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 IGSF10Q6WRI0 2623 aa18.16■□□□□ 0.5
RETREG3-212ENST00000593251 M0QYV0 167 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 RNF225M0QZC1 329 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 LTFP02788 710 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 IGHV4-34P06331 123 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 CTSKP43235 329 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 GRK6P43250 576 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 SLC11A2P49281 568 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 TBX4P57082 545 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 CYP4F3Q08477 520 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 PRAMEF14Q5SWL7 426 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 UNC45BQ8IWX7 931 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 DHX40Q8IX18 779 aaKnown RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 SLC35F5Q8WV83 523 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 GOLGA1Q92805 767 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 ERCC4Q92889 916 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 SLC35C1Q96A29 364 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 LMLNQ96KR4 655 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 SCAND2PQ9GZW5 306 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 RSPH9Q9H1X1 276 aaPredicted RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 PABPC3Q9H361 631 aaKnown RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
RETREG3-212ENST00000593251 PCDHB4Q9Y5E5 795 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 MYLKQ15746 1914 aa18.15■□□□□ 0.5
RETREG3-212ENST00000593251 DOCK9Q9BZ29 2069 aa18.14■□□□□ 0.5
RETREG3-212ENST00000593251 URB1O60287 2271 aaKnown RBP18.14■□□□□ 0.49
RETREG3-212ENST00000593251 TRABD2BA6NFA1 517 aa18.14■□□□□ 0.49
RETREG3-212ENST00000593251 TNFSF14O43557 240 aa18.14■□□□□ 0.49
RETREG3-212ENST00000593251 SIN3BO75182 1162 aa18.14■□□□□ 0.49
RETREG3-212ENST00000593251 TBXAS1P24557 533 aaPredicted RBP18.14■□□□□ 0.49
RETREG3-212ENST00000593251 BRD2P25440 801 aaKnown RBP18.14■□□□□ 0.49
RETREG3-212ENST00000593251 CSKP41240 450 aa18.14■□□□□ 0.49
RETREG3-212ENST00000593251 RPS24P62847 133 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms