RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PCDH19Q8TAB3 1148 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 HDAC7Q8WUI4 952 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 C1orf54Q8WWF1 131 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 SLCO2A1Q92959 643 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 RNF34Q969K3 372 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 ZNF512Q96ME7 567 aaPredicted RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 PLEKHA4Q9H4M7 779 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 ANLNQ9NQW6 1124 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 CWC15Q9P013 229 aaKnown RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 MARCH2Q9P0N8 246 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 AMACRQ9UHK6 382 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 NUDT5Q9UKK9 219 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 RAB21Q9UL25 225 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 R3HDM2Q9Y2K5 976 aaKnown RBP13.93□□□□□ -0.18
VMP1-217ENST00000593168 DENND4AQ7Z401 1863 aa13.93□□□□□ -0.18
VMP1-217ENST00000593168 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 APOL1O14791 398 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 TGM2P21980 687 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 MCM3P25205 808 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 ATP5C1P36542 298 aaKnown RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 NBL1P41271 181 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 PTGIRP43119 386 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 CLCN4P51793 760 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 TBX4P57082 545 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 RING1Q06587 406 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 MTA1Q13330 715 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 PABPC1LQ4VXU2 614 aaKnown RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 C10orf120Q5SQS8 335 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 WDR93Q6P2C0 686 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 TTC27Q6P3X3 843 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 PYROXD2Q8N2H3 581 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 PQLC3Q8N755 202 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 NKD2Q969F2 451 aaPredicted RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 MAGEB5Q9BZ81 275 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 TMPRSS4Q9NRS4 437 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 STIM2Q9P246 746 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 DPP7Q9UHL4 492 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 DMGDHQ9UI17 866 aaKnown RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 HBS1LQ9Y450 684 aaKnown RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 HCFC2Q9Y5Z7 792 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
VMP1-217ENST00000593168 MTCL1Q9Y4B5 1905 aaKnown RBP13.92□□□□□ -0.18
VMP1-217ENST00000593168 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 MSI1O43347 362 aaKnown RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 LIASO43766 372 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 CLASP2O75122 1294 aaKnown RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 TBX18O95935 607 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 F11P03951 625 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ASGR2P07307 311 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 HTR7P34969 479 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 FOXK2Q01167 660 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 DR1Q01658 176 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 LMNB2Q03252 620 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ACBD5Q5T8D3 534 aaPredicted RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 SYDE1Q6ZW31 735 aaPredicted RBP13.91□□□□□ -0.18
VMP1-217ENST00000593168 CCDC105Q8IYK2 499 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ELMOD1Q8N336 334 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 PLD5Q8N7P1 536 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 SLC35B2Q8TB61 432 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ACTL9Q8TC94 416 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 GRK7Q8WTQ7 553 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 SLC22A17Q8WUG5 538 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ATG4AQ8WYN0 398 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 PNKPQ96T60 521 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 EPAS1Q99814 870 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 ADAM7Q9H2U9 754 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 CCSER2Q9H7U1 834 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 IL21Q9HBE4 155 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 SLC12A6Q9UHW9 1150 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 DNMT3LQ9UJW3 386 aa13.91□□□□□ -0.18
VMP1-217ENST00000593168 DCHS1Q96JQ0 3298 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 SLC12A8A0AV02 714 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 EEF2KO00418 725 aaKnown RBP13.9□□□□□ -0.18
VMP1-217ENST00000593168 TTI1O43156 1089 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 PAGE1O75459 146 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 ZMYND10O75800 440 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
VMP1-217ENST00000593168 ECEL1O95672 775 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 IGLV3-27P01718 113 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 APOEP02649 317 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 GOT1P17174 413 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 AMPD1P23109 780 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 HOXA9P31269 272 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 KCNJ1P48048 391 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 NR2C2P49116 596 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 DRG2P55039 364 aaKnown RBP13.9□□□□□ -0.18
VMP1-217ENST00000593168 MLLT6P55198 1093 aaPredicted RBP13.9□□□□□ -0.18
VMP1-217ENST00000593168 DYNLT1P63172 113 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 MRPS25P82663 173 aaKnown RBP13.9□□□□□ -0.18
VMP1-217ENST00000593168 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
VMP1-217ENST00000593168 OTUD4Q01804 1114 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms