RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 M0QYT0 321 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 TBL1XO60907 577 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 IGLV3-25P01717 112 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CYP1A1P04798 512 aaPredicted RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CCDC172P0C7W6 258 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 HOXB2P14652 356 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 GABRG2P18507 467 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 HOXD9P28356 352 aaPredicted RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 NOS2P35228 1153 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 NSFP46459 744 aaKnown RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 GABRB2P47870 512 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 SULT1E1P49888 294 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CREB5Q02930 508 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 NR1I3Q14994 352 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 ASIC2Q16515 512 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 GEN1Q17RS7 908 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 FAM133BQ5BKY9 247 aaKnown RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 RAP1GAP2Q684P5 730 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 TCEAL6Q6IPX3 200 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 ANKS1BQ7Z6G8 1248 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 C11orf74Q86VG3 221 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CHSY1Q86X52 802 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CHPFQ8IZ52 775 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 ZNF397Q8NF99 534 aaPredicted RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 BAP1Q92560 729 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 TCEAL3Q969E4 200 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 PRICKLE1Q96MT3 831 aaPredicted RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 PCDHB18PQ96TA0 734 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 GABRG3Q99928 467 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 AGPAT1Q99943 283 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 RTKNQ9BST9 563 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 METTL5Q9NRN9 209 aaKnown RBP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 VPS45Q9NRW7 570 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 CACNA2D2Q9NY47 1150 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 IFNKQ9P0W0 207 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 STIM2Q9P246 746 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 BCCIPQ9P287 314 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLIP3-205ENST00000592017 STAP1Q9ULZ2 295 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 RAD54BQ9Y620 910 aa14.44□□□□□ -0.1
CLIP3-205ENST00000592017 TYW5A2RUC4 315 aaKnown RBP14.43□□□□□ -0.1
CLIP3-205ENST00000592017 FOXD2O60548 495 aaPredicted RBP14.43□□□□□ -0.1
CLIP3-205ENST00000592017 ABCB4P21439 1286 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 CCR1P32246 355 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 MATKP42679 507 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 CLEC16AQ2KHT3 1053 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 PIK3R6Q5UE93 754 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 LRSAM1Q6UWE0 723 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 PGBD3Q8N328 593 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 ATP6V0D2Q8N8Y2 350 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 HJURPQ8NCD3 748 aaPredicted RBP14.43□□□□□ -0.1
CLIP3-205ENST00000592017 RNF214Q8ND24 703 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 CIPCQ9C0C6 399 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 SLC12A6Q9UHW9 1150 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 KIAA1549LQ6ZVL6 1849 aa14.43□□□□□ -0.1
CLIP3-205ENST00000592017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SLC2A3P11169 496 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 UNGP13051 313 aaPredicted RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 TFE3P19532 575 aaPredicted RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 MMP8P22894 467 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 FLT3P36888 993 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SCNN1AP37088 669 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 RPS24P62847 133 aaKnown RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 CENPCQ03188 943 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 AASDHQ4L235 1098 aaPredicted RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SFMBT2Q5VUG0 894 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 OTUD1Q5VV17 481 aaPredicted RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 TMEM215Q68D42 235 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 MFN1Q8IWA4 741 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 TMEFF1Q8IYR6 380 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 LGI2Q8N0V4 545 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 CFAP52Q8N1V2 620 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 EMC1Q8N766 993 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 C12orf50Q8NA57 414 aaPredicted RBP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 AZIN2Q96A70 460 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 MYEOVQ96EZ4 313 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 BTN2A3PQ96KV6 586 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 TBCBQ99426 244 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SLC6A17Q9H1V8 727 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLIP3-205ENST00000592017 RRN3Q9NYV6 651 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 ADAM22Q9P0K1 906 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 CALCOCO1Q9P1Z2 691 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 MYO6Q9UM54 1294 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 STON1Q9Y6Q2 735 aa14.42□□□□□ -0.1
CLIP3-205ENST00000592017 ABCA7Q8IZY2 2146 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 KCNU1A8MYU2 1149 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 F5H5T6 163 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 TM4SF5O14894 197 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 MAP3K13O43283 966 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 GJB6O95452 261 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 NDUFV2P19404 249 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 TACR2P21452 398 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 GGCXP38435 758 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 PTGER3P43115 390 aa14.41□□□□□ -0.1
CLIP3-205ENST00000592017 DHPSP49366 369 aaPredicted RBP14.41□□□□□ -0.1
CLIP3-205ENST00000592017 DEUP1Q05D60 604 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms