RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 LRRTM3Q86VH5 581 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 SEPT10Q9P0V9 454 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 INPP5FQ9Y2H2 1132 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 CSH1P0DML2 217 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 CSH2P0DML3 217 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 ALADP13716 330 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 ELNP15502 786 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 CXCR3P49682 368 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 TPI1P60174 286 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 TRIM71Q2Q1W2 868 aaKnown RBP20.29■□□□□ 0.84
MBD3-209ENST00000592012 ARL13BQ3SXY8 428 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 LGSNQ5TDP6 509 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 BSPRYQ5W0U4 402 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 OTOAQ7RTW8 1153 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 OR10T2Q8NGX3 314 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 RSPH1Q8WYR4 309 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 IRGQQ8WZA9 623 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 THOC1Q96FV9 657 aaKnown RBP20.29■□□□□ 0.84
MBD3-209ENST00000592012 WDCPQ9H6R7 721 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 DSEQ9UL01 958 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 SDR42E2A6NKP2 422 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 ITGB1P05556 798 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 PSMB4P28070 264 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 ITGA7Q13683 1181 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 FAM26DQ5JW98 314 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 PDZD4Q76G19 769 aaPredicted RBP20.28■□□□□ 0.84
MBD3-209ENST00000592012 ANKLE1Q8NAG6 615 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 STAMBPL1Q96FJ0 436 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 TMEM209Q96SK2 561 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 IGSF9Q9P2J2 1179 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 WDR27A2RRH5 827 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 STEAP4Q687X5 459 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 ZNF598Q86UK7 904 aaKnown RBP20.28■□□□□ 0.84
MBD3-209ENST00000592012 PCSK9Q8NBP7 692 aaKnown RBP20.28■□□□□ 0.84
MBD3-209ENST00000592012 FAM111AQ96PZ2 611 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 TKTL2Q9H0I9 626 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 MANSC1Q9H8J5 431 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 DMAP1Q9NPF5 467 aaPredicted RBP20.28■□□□□ 0.84
MBD3-209ENST00000592012 RAD54BQ9Y620 910 aa20.28■□□□□ 0.84
MBD3-209ENST00000592012 HMX2A2RU54 273 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 KCNK1O00180 336 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 RFPL1O75677 317 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 ALDH1A2O94788 518 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 CCDC15Q0P6D6 951 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 NPWQ8N729 165 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 ARNTL2Q8WYA1 636 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 PTPRN2Q92932 1015 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 KLC4Q9NSK0 619 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 OR12D3Q9UGF7 316 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 NOD1Q9Y239 953 aa20.27■□□□□ 0.84
MBD3-209ENST00000592012 F8W810 466 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 SKIP12755 728 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 CRADDP78560 199 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 OVOS1Q6IE37 1185 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 CDHR3Q6ZTQ4 885 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 PID1Q7Z2X4 250 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 SCML4Q8N228 414 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 APBB2Q92870 758 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 UROC1Q96N76 676 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 SRPK1Q96SB4 655 aaKnown RBP20.27■□□□□ 0.83
MBD3-209ENST00000592012 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.83
MBD3-209ENST00000592012 PIH1D1Q9NWS0 290 aaKnown RBP20.27■□□□□ 0.83
MBD3-209ENST00000592012 RNF186Q9NXI6 227 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 USH1CQ9Y6N9 552 aa20.27■□□□□ 0.83
MBD3-209ENST00000592012 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 NCAM2O15394 837 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 KRT38O76015 456 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 PAX3P23760 479 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 NCALDP61601 193 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 PPIDQ08752 370 aaKnown RBP20.26■□□□□ 0.83
MBD3-209ENST00000592012 CASC4Q6P4E1 433 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 DCLRE1AQ6PJP8 1040 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 CHSY1Q86X52 802 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 SMC1BQ8NDV3 1235 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 MTBPQ96DY7 904 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 SUSD3Q96L08 255 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 SNX10Q9Y5X0 201 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 PTPRDP23468 1912 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 COL4A4P53420 1690 aaPredicted RBP20.26■□□□□ 0.83
MBD3-209ENST00000592012 COPEO14579 308 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 ALDH1A1P00352 501 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 YY1P25490 414 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 PTPN3P26045 913 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 SESN2P58004 480 aaPredicted RBP20.26■□□□□ 0.83
MBD3-209ENST00000592012 IFRD2Q12894 506 aaPredicted RBP20.26■□□□□ 0.83
MBD3-209ENST00000592012 BMPR2Q13873 1038 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 TAC4Q86UU9 113 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 UNC5BQ8IZJ1 945 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 SCAMP5Q8TAC9 235 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 ECT2Q9H8V3 914 aa20.26■□□□□ 0.83
MBD3-209ENST00000592012 HGSO14964 777 aaPredicted RBP20.25■□□□□ 0.83
MBD3-209ENST00000592012 MGAT1P26572 445 aa20.25■□□□□ 0.83
MBD3-209ENST00000592012 CYB5D1Q6P9G0 228 aa20.25■□□□□ 0.83
MBD3-209ENST00000592012 C10orf82Q8WW14 230 aa20.25■□□□□ 0.83
MBD3-209ENST00000592012 TTC17Q96AE7 1141 aa20.25■□□□□ 0.83
MBD3-209ENST00000592012 SQORQ9Y6N5 450 aa20.25■□□□□ 0.83
MBD3-209ENST00000592012 INPPL1O15357 1258 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 LRIG2O94898 1065 aa20.24■□□□□ 0.83
MBD3-209ENST00000592012 ZNF135P52742 658 aaPredicted RBP20.24■□□□□ 0.83
MBD3-209ENST00000592012 MAPRE1Q15691 268 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms