RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 RSPRY1Q96DX4 576 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 RNF38Q9H0F5 515 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 TASP1Q9H6P5 420 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 PIGVQ9NUD9 493 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 SFMBT1Q9UHJ3 866 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 GMEB2Q9UKD1 530 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 NUDT5Q9UKK9 219 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 AMFRQ9UKV5 643 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.35
GCDH-213ENST00000590627 HBS1LQ9Y450 684 aaKnown RBP17.21■□□□□ 0.35
GCDH-213ENST00000590627 MIF4GDA9UHW6 222 aaKnown RBP17.2■□□□□ 0.34
GCDH-213ENST00000590627 SPOPO43791 374 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 FTCDO95954 541 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 IGLV3-27P01718 113 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 CTNNA2P26232 953 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 CXCL12P48061 93 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 TAS2R40P59535 323 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 SLC7A9P82251 487 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 CYP4F8P98187 520 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
GCDH-213ENST00000590627 RING1Q06587 406 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 TRIP4Q15650 581 aaPredicted RBP17.2■□□□□ 0.34
GCDH-213ENST00000590627 HADHQ16836 314 aaKnown RBP17.2■□□□□ 0.34
GCDH-213ENST00000590627 CDO1Q16878 200 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 ARHGAP15Q53QZ3 475 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 RAB6CQ53S08 254 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 STXBP5Q5T5C0 1151 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 POLNQ7Z5Q5 900 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 RALGPS2Q86X27 583 aaPredicted RBP17.2■□□□□ 0.34
GCDH-213ENST00000590627 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 ADAM32Q8TC27 787 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 SLC39A13Q96H72 371 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 HES6Q96HZ4 224 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 WDR24Q96S15 920 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 SLC46A2Q9BY10 475 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 RAB6CQ9H0N0 254 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 RAB23Q9ULC3 237 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 HYOU1Q9Y4L1 999 aa17.2■□□□□ 0.34
GCDH-213ENST00000590627 TRAV19A0A0A6YYK7 116 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 MDM4O15151 490 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 PSTPIP1O43586 416 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 PAPSS2O95340 614 aaPredicted RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 SLC2A3P11169 496 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 HDCP19113 662 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 TGM1P22735 817 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 CTNNA1P35221 906 aaKnown RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 ATXN1P54253 815 aaKnown RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 AIF1P55008 147 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 COG7P83436 770 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 NME3Q13232 169 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 GAS6Q14393 721 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 BOLA3Q53S33 107 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 DGKKQ5KSL6 1271 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 BRMS1LQ5PSV4 323 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 GPR158Q5T848 1215 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 LAIR1Q6GTX8 287 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 CYP4V2Q6ZWL3 525 aaPredicted RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 SND1Q7KZF4 910 aaKnown RBP eCLIP17.19■□□□□ 0.34
GCDH-213ENST00000590627 RHOT1Q8IXI2 618 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 TEKT4Q8WW24 435 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 NTAN1Q96AB6 310 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 FCRL2Q96LA5 508 aaPredicted RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 C16orf45Q96MC5 204 aaPredicted RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 KLF16Q9BXK1 252 aaPredicted RBP17.19■□□□□ 0.34
GCDH-213ENST00000590627 NACA2Q9H009 215 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 ARHGEF38Q9NXL2 777 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 RASAL2Q9UJF2 1139 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 PCDHA3Q9Y5H8 950 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 ANAPC1Q9H1A4 1944 aa17.19■□□□□ 0.34
GCDH-213ENST00000590627 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 KCNU1A8MYU2 1149 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 SPECC1L-ADORA2AF8WAN1 911 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 MSI1O43347 362 aaKnown RBP17.18■□□□□ 0.34
GCDH-213ENST00000590627 PRPSAP2O60256 369 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 KRT7P08729 469 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 TCF4P15884 667 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 IL1R2P27930 398 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 CCR1P32246 355 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 CNR2P34972 360 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 TBX4P57082 545 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 SATB1Q01826 763 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 SCAPQ12770 1279 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 MTA1Q13330 715 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 PSTKQ8IV42 348 aaKnown RBP17.18■□□□□ 0.34
GCDH-213ENST00000590627 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
GCDH-213ENST00000590627 ZFRQ96KR1 1074 aaKnown RBP17.18■□□□□ 0.34
GCDH-213ENST00000590627 SLC22A12Q96S37 553 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 PEBP4Q96S96 227 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 TLR10Q9BXR5 811 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 WDCPQ9H6R7 721 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 TRPC7Q9HCX4 862 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.18■□□□□ 0.34
GCDH-213ENST00000590627 OBSL1O75147 1896 aa17.18■□□□□ 0.34
GCDH-213ENST00000590627 DENND4CQ5VZ89 1909 aa17.17■□□□□ 0.34
GCDH-213ENST00000590627 SLC12A8A0AV02 714 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms