RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PTPRNQ16849 979 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 FUT11Q495W5 492 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 C14orf80Q86SX3 495 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 CHPFQ8IZ52 775 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 LGI2Q8N0V4 545 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 EMC1Q8N766 993 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 HJURPQ8NCD3 748 aaPredicted RBP18.88■□□□□ 0.61
DDX39A-212ENST00000590260 JOSD2Q8TAC2 188 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 RUBCNQ92622 972 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 PGAP3Q96FM1 320 aaPredicted RBP18.88■□□□□ 0.61
DDX39A-212ENST00000590260 AGPAT1Q99943 283 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 DUSP15Q9H1R2 295 aaPredicted RBP18.88■□□□□ 0.61
DDX39A-212ENST00000590260 METTL5Q9NRN9 209 aaKnown RBP18.88■□□□□ 0.61
DDX39A-212ENST00000590260 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 STON1Q9Y6Q2 735 aa18.88■□□□□ 0.61
DDX39A-212ENST00000590260 TCRBV5S1A1TA0A578 114 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 APOEP02649 317 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 PABPC1P11940 636 aaKnown RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 PRKCHP24723 683 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 SULT1E1P49888 294 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 SNX16P57768 344 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 LMAN2Q12907 356 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CKAP5Q14008 2032 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 SKOR2Q2VWA4 1001 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 FBXL22Q6P050 247 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 TRIM72Q6ZMU5 477 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 NUDT18Q6ZVK8 323 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CHST9Q7L1S5 443 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 MON1BQ7L1V2 547 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CACNA2D4Q7Z3S7 1137 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 TRMT11Q7Z4G4 463 aaKnown RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CHSY1Q86X52 802 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CIR1Q86X95 450 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 PHF13Q86YI8 300 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 FIBINQ8TAL6 211 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 HMGB4Q8WW32 186 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 RLN3Q8WXF3 142 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 IGSF8Q969P0 613 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 MYO19Q96H55 970 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 ZC3H10Q96K80 434 aaKnown RBP18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CFAP57Q96MR6 1250 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 CD93Q9NPY3 652 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 ARHGEF38Q9NXL2 777 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 MYO6Q9UM54 1294 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 SNX10Q9Y5X0 201 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 HS3ST4Q9Y661 456 aa18.87■□□□□ 0.61
DDX39A-212ENST00000590260 PAGE1O75459 146 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 FERP16591 822 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 NDUFV2P19404 249 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 CCR1P32246 355 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 GSCP56915 257 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-212ENST00000590260 MAP7D1Q3KQU3 841 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 SLC25A52Q3SY17 297 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 PLK5Q496M5 336 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 SH3PXD2AQ5TCZ1 1133 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 LAIR1Q6GTX8 287 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 ARCQ7LC44 396 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 DNAAF5Q86Y56 855 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 MFN1Q8IWA4 741 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 ZNF683Q8IZ20 524 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 ATP6V0D2Q8N8Y2 350 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 OR52K2Q8NGK3 314 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 CYB5D2Q8WUJ1 264 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 CIPCQ9C0C6 399 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 POLMQ9NP87 494 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-212ENST00000590260 TAS2R14Q9NYV8 317 aa18.86■□□□□ 0.61
DDX39A-212ENST00000590260 MBD1Q9UIS9 605 aaPredicted RBP18.86■□□□□ 0.61
DDX39A-212ENST00000590260 ENDOD1O94919 500 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 LUC7L3O95232 432 aaKnown RBP18.85■□□□□ 0.61
DDX39A-212ENST00000590260 SERPINC1P01008 464 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 GBP1P32455 592 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 P2RY2P41231 377 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 EIF4HQ15056 248 aaKnown RBP18.85■□□□□ 0.61
DDX39A-212ENST00000590260 NFKBIBQ15653 356 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 FILIP1LQ4L180 1135 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 MBLAC2Q68D91 279 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 CEP68Q76N32 757 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 DDX50Q9BQ39 737 aaKnown RBP18.85■□□□□ 0.61
DDX39A-212ENST00000590260 TMEM245Q9H330 911 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 RRN3Q9NYV6 651 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 AIPL1Q9NZN9 384 aa18.85■□□□□ 0.61
DDX39A-212ENST00000590260 TNRC6BQ9UPQ9 1833 aaKnown RBP18.85■□□□□ 0.61
DDX39A-212ENST00000590260 DMXL1Q9Y485 3027 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 C2CD4BA6NLJ0 364 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 SLC2A3P11169 496 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 HLA-EP13747 358 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 COPAP53621 1224 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 AUHQ13825 339 aaKnown RBP18.84■□□□□ 0.61
DDX39A-212ENST00000590260 C15orf59Q2T9L4 293 aaPredicted RBP18.84■□□□□ 0.61
DDX39A-212ENST00000590260 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 C5orf22Q49AR2 442 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 CXorf57Q6NSI4 855 aaKnown RBP18.84■□□□□ 0.61
DDX39A-212ENST00000590260 ZNF571Q7Z3V5 609 aaPredicted RBP18.84■□□□□ 0.61
DDX39A-212ENST00000590260 APCDD1Q8J025 514 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 AHI1Q8N157 1196 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 CARNMT1Q8N4J0 409 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 ZNF366Q8N895 744 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 WFIKKN2Q8TEU8 576 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 MRGPRX3Q96LB0 322 aa18.84■□□□□ 0.61
DDX39A-212ENST00000590260 MRGPRX1Q96LB2 322 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms