RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 VANGL2Q9ULK5 521 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 JRKLQ9Y4A0 524 aa15.69■□□□□ 0.1
ATG4D-211ENST00000589753 KIF26AQ9ULI4 1882 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-211ENST00000589753 LRRD1A4D1F6 860 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 TRDMT1O14717 391 aaKnown RBP15.68■□□□□ 0.1
ATG4D-211ENST00000589753 DDX3YO15523 660 aaKnown RBP15.68■□□□□ 0.1
ATG4D-211ENST00000589753 CREB3O43889 395 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 TSPAN3O60637 253 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 SRGAP2O75044 1071 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 NFATC1O95644 943 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 GDI1P31150 447 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 PEX5P50542 639 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 DNA2P51530 1060 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 ARSEP51690 589 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 ZNF135P52742 658 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-211ENST00000589753 RWDD2BP57060 319 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 SEMA3BQ13214 749 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 PDK2Q15119 407 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 RPS6KA1Q15418 735 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 TRIM68Q6AZZ1 485 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 TPGS1Q6ZTW0 290 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 MAP7D3Q8IWC1 876 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 ZNF683Q8IZ20 524 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 ADGRG2Q8IZP9 1017 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 SLC44A3Q8N4M1 653 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 FAM71BQ8TC56 605 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 RAPGEF5Q92565 580 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 ATP2A3Q93084 1043 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 RPRD1AQ96P16 312 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-211ENST00000589753 PCDH18Q9HCL0 1135 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 SPHK2Q9NRA0 654 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 XIRP2A4UGR9 3374 aa15.68■□□□□ 0.1
ATG4D-211ENST00000589753 TYW5A2RUC4 315 aaKnown RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 PI4K2BG5E9Z4 385 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 H3BRJ5 948 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 EEF2KO00418 725 aaKnown RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 GFRA2O00451 464 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 LRIG2O94898 1065 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 ZRANB2O95218 330 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 CYBBP04839 570 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 ASGR2P07307 311 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 CD48P09326 243 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 BMP1P13497 986 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 ARSAP15289 507 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 KDELR1P24390 212 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 HTR7P34969 479 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 ARL4AP40617 200 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 TPI1P60174 286 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 DPYSL3Q14195 570 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 C5orf22Q49AR2 442 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 MPPE1Q53F39 396 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 RABGAP1LQ5R372 815 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 MANEALQ5VSG8 457 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 HJURPQ8NCD3 748 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 EXD1Q8NHP7 514 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 DDI1Q8WTU0 396 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 ALG3Q92685 438 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 IRF7Q92985 503 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 IGSF8Q969P0 613 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 TBC1D31Q96DN5 1066 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 TMA16Q96EY4 203 aaKnown RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 MYEOVQ96EZ4 313 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 PRICKLE1Q96MT3 831 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 WDR24Q96S15 920 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 TLR10Q9BXR5 811 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 CALN1Q9BXU9 219 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 EBF3Q9H4W6 596 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 BRD9Q9H8M2 597 aa15.67■□□□□ 0.1
ATG4D-211ENST00000589753 PPARGC1AQ9UBK2 798 aaKnown RBP15.67■□□□□ 0.1
ATG4D-211ENST00000589753 IGLV3-10A0A075B6K4 115 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 DRGXA6NNA5 263 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ENC1O14682 589 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ADH1CP00326 375 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 CYP17A1P05093 508 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 GOT1P17174 413 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 EPHB2P29323 1055 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 HCAR3P49019 387 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 SGSHP51688 502 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ETF1P62495 437 aaKnown RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RPS24P62847 133 aaKnown RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RUNX3Q13761 415 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 DHCR24Q15392 516 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 LY6G5CQ5SRR4 150 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 TTC39BQ5VTQ0 682 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RWDD4Q6NW29 188 aaKnown RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RHBDF2Q6PJF5 856 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RFX8Q6ZV50 586 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 NYAP1Q6ZVC0 841 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 TMEM25Q86YD3 366 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 CCDC50Q8IVM0 306 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 CFAP52Q8N1V2 620 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 CPA6Q8N4T0 437 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 TSC1Q92574 1164 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 RNF25Q96BH1 459 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ZNF670Q9BS34 389 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ZYG11BQ9C0D3 744 aa15.66■□□□□ 0.1
ATG4D-211ENST00000589753 ECT2Q9H8V3 914 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms