RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ADAM22Q9P0K1 906 aa19.89■□□□□ 0.77
CIRBP-217ENST00000588230 F5H5T6 163 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 TIMM44O43615 452 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 F9P00740 461 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 CALB1P05937 261 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 HOXB2P14652 356 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 TACR2P21452 398 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 TNFAIP3P21580 790 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 FLT3P36888 993 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 EIF4HQ15056 248 aaKnown RBP19.88■□□□□ 0.77
CIRBP-217ENST00000588230 SLC25A52Q3SY17 297 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 LRSAM1Q6UWE0 723 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 PHLDB2Q86SQ0 1253 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 KBTBD6Q86V97 674 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 PHF13Q86YI8 300 aaPredicted RBP19.88■□□□□ 0.77
CIRBP-217ENST00000588230 MFN1Q8IWA4 741 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 CFAP52Q8N1V2 620 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 WFIKKN2Q8TEU8 576 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 PRICKLE1Q96MT3 831 aaPredicted RBP19.88■□□□□ 0.77
CIRBP-217ENST00000588230 CIPCQ9C0C6 399 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 METTL5Q9NRN9 209 aaKnown RBP19.88■□□□□ 0.77
CIRBP-217ENST00000588230 ABCB8Q9NUT2 735 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 TMEM51Q9NW97 253 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 ELOVL2Q9NXB9 296 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 IFNKQ9P0W0 207 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 TMEM59LQ9UK28 342 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 PAXBP1Q9Y5B6 917 aa19.88■□□□□ 0.77
CIRBP-217ENST00000588230 ZBTB24O43167 697 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-217ENST00000588230 HLA-FP30511 346 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 ID4P47928 161 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 DEUP1Q05D60 604 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 FIGNQ5HY92 759 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 ARCQ7LC44 396 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-217ENST00000588230 CARNMT1Q8N4J0 409 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 MDGA1Q8NFP4 955 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 NT5C3BQ969T7 300 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 MYEOVQ96EZ4 313 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 TBCBQ99426 244 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 WDCPQ9H6R7 721 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 PIGVQ9NUD9 493 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 CACNA2D2Q9NY47 1150 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 AIPL1Q9NZN9 384 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 BCCIPQ9P287 314 aaKnown RBP eCLIP19.87■□□□□ 0.77
CIRBP-217ENST00000588230 GGA2Q9UJY4 613 aa19.87■□□□□ 0.77
CIRBP-217ENST00000588230 LAMA1P25391 3075 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 TCRBV21S2A2A0A5A6 115 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 NPC1O15118 1278 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 LRP3O75074 770 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 TPM3P06753 285 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 PABPC1P11940 636 aaKnown RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 TFE3P19532 575 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 CXCR3P49682 368 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 SPEM2Q0P670 501 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 PTP4A2Q12974 167 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 CDH18Q13634 790 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 BRMS1LQ5PSV4 323 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 OTUD1Q5VV17 481 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 RNF43Q68DV7 783 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 CHST9Q7L1S5 443 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 PGBD3Q8N328 593 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 GPR161Q8N6U8 529 aaKnown RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 EMC1Q8N766 993 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 FIBINQ8TAL6 211 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 PGAP3Q96FM1 320 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 ZC3H10Q96K80 434 aaKnown RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 TTYH3Q9C0H2 523 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 CD248Q9HCU0 757 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 DLL3Q9NYJ7 618 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 CALCOCO1Q9P1Z2 691 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 THAP10Q9P2Z0 257 aaPredicted RBP19.86■□□□□ 0.77
CIRBP-217ENST00000588230 STON1Q9Y6Q2 735 aa19.86■□□□□ 0.77
CIRBP-217ENST00000588230 DCLK1O15075 740 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 PAGE1O75459 146 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 KRT3P12035 628 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 PBX1P40424 430 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 KLHL30Q0D2K2 578 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 PLK5Q496M5 336 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 USP39Q53GS9 565 aaKnown RBP19.85■□□□□ 0.77
CIRBP-217ENST00000588230 RABGAP1LQ5R372 815 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 TMEM215Q68D42 235 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 ACAD10Q6JQN1 1059 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 TRNP1Q6NT89 227 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 AHI1Q8N157 1196 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.85■□□□□ 0.77
CIRBP-217ENST00000588230 WFDC5Q8TCV5 224 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 HMGB4Q8WW32 186 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 SORCS1Q8WY21 1168 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 CFAP57Q96MR6 1250 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 PRMT1Q99873 361 aaKnown RBP19.85■□□□□ 0.77
CIRBP-217ENST00000588230 GABRG3Q99928 467 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 SELENOOQ9BVL4 669 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 ADAM33Q9BZ11 813 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 TPSD1Q9BZJ3 242 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 TKTL2Q9H0I9 626 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 SIK2Q9H0K1 926 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 DUSP15Q9H1R2 295 aaPredicted RBP19.85■□□□□ 0.77
CIRBP-217ENST00000588230 HAUS4Q9H6D7 363 aa19.85■□□□□ 0.77
CIRBP-217ENST00000588230 A0A1W2PQJ5 194 aa19.84■□□□□ 0.77
CIRBP-217ENST00000588230 WASH3PC4AMC7 463 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms