RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 TMEM216Q9P0N5 145 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 MORF4L1Q9UBU8 362 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 APPL1Q9UKG1 709 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 RGSL1A5PLK6 1076 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 E9PBE3 544 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 MDM4O15151 490 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 KLHL41O60662 606 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 H2AFYO75367 372 aaKnown RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 HSPA4LO95757 839 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 ZFXP17010 805 aaPredicted RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 SCNN1BP51168 640 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 RAB6CQ53S08 254 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 ACBD5Q5T8D3 534 aaPredicted RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 OR6B2Q6IFH4 312 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 SCYL2Q6P3W7 929 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 CASC4Q6P4E1 433 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 NUP93Q8N1F7 819 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 PLEKHG4BQ96PX9 1271 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 HAUS8Q9BT25 410 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 NAT9Q9BTE0 207 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 RAB6CQ9H0N0 254 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 GPATCH2LQ9NWQ4 482 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 CNOT11Q9UKZ1 510 aaKnown RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 RIPK3Q9Y572 518 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 CILPO75339 1184 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 VDRP11473 427 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 PGAM1P18669 254 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 TYK2P29597 1187 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 NR2C2P49116 596 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 CDH8P55286 799 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 MRPS22P82650 360 aaKnown RBP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 STILQ15468 1287 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 QKIQ96PU8 341 aaKnown RBP eCLIP16.89■□□□□ 0.29
RANBP3-209ENST00000587411 FERMT1Q9BQL6 677 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 ELOVL4Q9GZR5 314 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 TCF7L2Q9NQB0 619 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 AK5Q9Y6K8 562 aa16.89■□□□□ 0.29
RANBP3-209ENST00000587411 MAP3K6O95382 1288 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 PIK3R1P27986 724 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 GRIA1P42261 906 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 ORC1Q13415 861 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 ZNF423Q2M1K9 1284 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 PIGGQ5H8A4 983 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 FAM183BPQ6ZVS7 135 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 UNC5BQ8IZJ1 945 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 RP9Q8TA86 221 aaKnown RBP16.88■□□□□ 0.29
RANBP3-209ENST00000587411 KBTBD7Q8WVZ9 684 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 TWNKQ96RR1 684 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 SNRNP25Q9BV90 132 aaKnown RBP16.88■□□□□ 0.29
RANBP3-209ENST00000587411 RNPEPQ9H4A4 650 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 RPAP3Q9H6T3 665 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-209ENST00000587411 RHBDL2Q9NX52 303 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 AIM2O14862 343 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 KRT19P08727 400 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 SLC5A2P31639 672 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 MAGEA8P43361 318 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 TARBP2Q15633 366 aaKnown RBP16.88■□□□□ 0.29
RANBP3-209ENST00000587411 CCDC14Q49A88 953 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 SLC9B1Q4ZJI4 515 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 IYDQ6PHW0 289 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 DSELQ8IZU8 1212 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 SLC2A11Q9BYW1 496 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 INO80BQ9C086 356 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-209ENST00000587411 CYP3A43Q9HB55 503 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 NRBP2Q9NSY0 501 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 ADAM28Q9UKQ2 775 aa16.88■□□□□ 0.29
RANBP3-209ENST00000587411 PRSS51A0A1B0GVH4 220 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 KPNA7A9QM74 516 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 H0YIN7 160 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 PRKCBP05771 671 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 MMP10P09238 476 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 CDH2P19022 906 aaPredicted RBP16.87■□□□□ 0.29
RANBP3-209ENST00000587411 PROZP22891 400 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 CYP2F1P24903 491 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ADSLP30566 484 aaPredicted RBP16.87■□□□□ 0.29
RANBP3-209ENST00000587411 GP5P40197 560 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 THOP1P52888 689 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 LRRC8BQ6P9F7 803 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 SNX32Q86XE0 403 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ZBTB8OSQ8IWT0 167 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ZNF781Q8N8C0 355 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ISL2Q96A47 359 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 NGRNQ9NPE2 291 aaKnown RBP16.87■□□□□ 0.29
RANBP3-209ENST00000587411 SLC17A6Q9P2U8 582 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 PCDHGB4Q9UN71 923 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 ZNF510Q9Y2H8 683 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 PCDHGB5Q9Y5G0 923 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 CEPT1Q9Y6K0 416 aa16.87■□□□□ 0.29
RANBP3-209ENST00000587411 SSC5DA1L4H1 1573 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms