RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 NEK11Q8NG66 645 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 KIF18AQ8NI77 898 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ADAM32Q8TC27 787 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 WFDC5Q8TCV5 224 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 BHMTQ93088 406 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 PGAP3Q96FM1 320 aaPredicted RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ZC3H10Q96K80 434 aaKnown RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 BTN2A3PQ96KV6 586 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 SPAG5Q96R06 1193 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ACOX2Q99424 681 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 NPY6RQ99463 290 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 PRMT1Q99873 361 aaKnown RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 SYT11Q9BT88 431 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TTYH3Q9C0H2 523 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ZDHHC4Q9NPG8 344 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 CALCOCO1Q9P1Z2 691 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 PCDH15Q96QU1 1955 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 ABCA7Q8IZY2 2146 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 CAPN9O14815 690 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 NPC1O15118 1278 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 AXIN1O15169 862 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 RPP40O75818 363 aaKnown RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 CCDC175P0C221 793 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 UNGP13051 313 aaPredicted RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TGM1P22735 817 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 FECHP22830 423 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 MMP8P22894 467 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 NOS2P35228 1153 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 STAT1P42224 750 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 MATKP42679 507 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 CENPCQ03188 943 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 PTP4A2Q12974 167 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 SIM2Q14190 667 aaPredicted RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 DCAF6Q58WW2 860 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 FIGNQ5HY92 759 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 MS4A13Q5J8X5 152 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TMEM215Q68D42 235 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 OR6B2Q6IFH4 312 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TRNP1Q6NT89 227 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 RFWD3Q6PCD5 774 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TRIM72Q6ZMU5 477 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TMEM139Q8IV31 216 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 ZNF557Q8N988 423 aaPredicted RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 HJURPQ8NCD3 748 aaPredicted RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 DDI1Q8WTU0 396 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 BAP1Q92560 729 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 C18orf8Q96DM3 657 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TMA16Q96EY4 203 aaKnown RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 MYEOVQ96EZ4 313 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 LMLNQ96KR4 655 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 RRN3Q9NYV6 651 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 THAP10Q9P2Z0 257 aaPredicted RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 XPO7Q9UIA9 1087 aaKnown RBP8.95□□□□□ -0.98
ATG4D-202ENST00000585437 TMEM59LQ9UK28 342 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 MYO6Q9UM54 1294 aa8.95□□□□□ -0.98
ATG4D-202ENST00000585437 GOLGA6L7A0A1B0GV03 622 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 I6L893 689 aaPredicted RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 TSPAN3O60637 253 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 LRP3O75074 770 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 GRAP2O75791 330 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 APOEP02649 317 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 GYPCP04921 128 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 SLC2A3P11169 496 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 HOXB2P14652 356 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 GABRG2P18507 467 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 TFE3P19532 575 aaPredicted RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 CASP14P31944 242 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 CCR1P32246 355 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 FLT3P36888 993 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 IL12RB1P42701 662 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ADKP55263 362 aaKnown RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 CDK17Q00537 523 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 MTA1Q13330 715 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 C5orf22Q49AR2 442 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ZC3H12AQ5D1E8 599 aaKnown RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ARTNQ5T4W7 220 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 NAA35Q5VZE5 725 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ANO7Q6IWH7 933 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 MTERF4Q7Z6M4 381 aaKnown RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ADIPOR2Q86V24 386 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ERICH1Q86X53 443 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 MSANTD4Q8NCY6 345 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 FIBINQ8TAL6 211 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 WFIKKN2Q8TEU8 576 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 CPA5Q8WXQ8 436 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 LOXL4Q96JB6 756 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 PCDHB18PQ96TA0 734 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 DDX50Q9BQ39 737 aaKnown RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 TPSD1Q9BZJ3 242 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 DUSP15Q9H1R2 295 aaPredicted RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 SYNCQ9H7C4 482 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 FAM204AQ9H8W3 233 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 POLMQ9NP87 494 aaPredicted RBP8.94□□□□□ -0.98
ATG4D-202ENST00000585437 PIGVQ9NUD9 493 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ABHD10Q9NUJ1 306 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 DDIT4Q9NX09 232 aa8.94□□□□□ -0.98
ATG4D-202ENST00000585437 ELOVL2Q9NXB9 296 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms