RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 FAM207AQ9NSI2 230 aaPredicted RBP18.53■□□□□ 0.56
ERBB2-221ENST00000584888 NOCTQ9UK39 431 aaKnown RBP18.53■□□□□ 0.56
ERBB2-221ENST00000584888 STON1Q9Y6Q2 735 aa18.53■□□□□ 0.56
ERBB2-221ENST00000584888 CYBBP04839 570 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.56
ERBB2-221ENST00000584888 HOXD12P35452 270 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 SHC2P98077 582 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 ZNF33AQ06730 810 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 IQCB1Q15051 598 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 UAP1L1Q3KQV9 507 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 EFHC1Q5JVL4 640 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 SH3PXD2AQ5TCZ1 1133 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 PIK3R6Q5UE93 754 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 SLC23A3Q6PIS1 610 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 FAM183BPQ6ZVS7 135 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 ZNF397Q8NF99 534 aaPredicted RBP18.52■□□□□ 0.56
ERBB2-221ENST00000584888 TMA16Q96EY4 203 aaKnown RBP18.52■□□□□ 0.56
ERBB2-221ENST00000584888 CYP8B1Q9UNU6 501 aa18.52■□□□□ 0.56
ERBB2-221ENST00000584888 GOLGA6L7A0A1B0GV03 622 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 IRAK2O43187 625 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 TSPAN3O60637 253 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 TRUB2O95900 331 aaKnown RBP18.51■□□□□ 0.55
ERBB2-221ENST00000584888 CFIP05156 583 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 CHRNB2P17787 502 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 ENGP17813 658 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 CSRP1P21291 193 aaKnown RBP18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SLC6A4P31645 630 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SOX5P35711 763 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 PI4KAP42356 2102 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 MAPK8P45983 427 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SGSHP51688 502 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SNX16P57768 344 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SLC6A3Q01959 620 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 UBXN1Q04323 297 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 DUOXA1Q1HG43 343 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 MPP7Q5T2T1 576 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 OR6B2Q6IFH4 312 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SLC26A9Q7LBE3 791 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 KIAA0907Q7Z7F0 614 aaPredicted RBP18.51■□□□□ 0.55
ERBB2-221ENST00000584888 ZNF677Q86XU0 584 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 DEFB106AQ8N104 65 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 ADAM32Q8TC27 787 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 DDI1Q8WTU0 396 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 NLRC4Q9NPP4 1024 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 CD93Q9NPY3 652 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 THAP10Q9P2Z0 257 aaPredicted RBP18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SLC6A14Q9UN76 642 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 CEP83Q9Y592 693 aa18.51■□□□□ 0.55
ERBB2-221ENST00000584888 TNRC6BQ9UPQ9 1833 aaKnown RBP18.51■□□□□ 0.55
ERBB2-221ENST00000584888 SMTNL1A8MU46 457 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 CAPN9O14815 690 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 NPC1O15118 1278 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 HSF2BPO75031 334 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 GFPT2O94808 682 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
ERBB2-221ENST00000584888 MMEP08473 750 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 SCNN1AP37088 669 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 SLC11A2P49281 568 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 ENPP2Q13822 863 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 STARD3Q14849 445 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 FUT11Q495W5 492 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 DCAF6Q58WW2 860 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 TAF3Q5VWG9 929 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 TMEM215Q68D42 235 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 RFWD3Q6PCD5 774 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 KIAA1324Q6UXG2 1013 aaKnown RBP18.5■□□□□ 0.55
ERBB2-221ENST00000584888 ANKS1BQ7Z6G8 1248 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 ZDHHC17Q8IUH5 632 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 SLC41A1Q8IVJ1 513 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 CEP76Q8TAP6 659 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 UCMAQ8WVF2 138 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 MYEOVQ96EZ4 313 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 LMLNQ96KR4 655 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
ERBB2-221ENST00000584888 FSCN3Q9NQT6 498 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 ELOVL2Q9NXB9 296 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 LAMA1P25391 3075 aa18.5■□□□□ 0.55
ERBB2-221ENST00000584888 CHD8Q9HCK8 2581 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 CKAP5Q14008 2032 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 ASCC3Q8N3C0 2202 aaKnown RBP18.49■□□□□ 0.55
ERBB2-221ENST00000584888 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 TEX33O43247 280 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 NDUFS2O75306 463 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 CYP1A1P04798 512 aaPredicted RBP18.49■□□□□ 0.55
ERBB2-221ENST00000584888 SERPINF2P08697 491 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 CEACAM1P13688 526 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 IL12RB1P42701 662 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 ZNF165P49910 485 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 NOMO3P69849 1222 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 CDK17Q00537 523 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 FMO1Q01740 532 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 ST3GAL2Q16842 350 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 ZC3H12AQ5D1E8 599 aaKnown RBP18.49■□□□□ 0.55
ERBB2-221ENST00000584888 XYLT1Q86Y38 959 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.49■□□□□ 0.55
ERBB2-221ENST00000584888 NEK11Q8NG66 645 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 SLC20A1Q8WUM9 679 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 C18orf8Q96DM3 657 aa18.49■□□□□ 0.55
ERBB2-221ENST00000584888 ZNF419Q96HQ0 510 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms