RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-220	ENST00000584684	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	GOLGA6L7	A0A1B0GV03	622 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	KCNU1	A8MYU2	1149 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	WASH3P	C4AMC7	463 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	AP5Z1	O43299	807 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	IGLV3-19	P01714	112 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	DLD	P09622	509 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	PRKCH	P24723	683 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	CCR1	P32246	355 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	COPB1	P53618	953 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	ATXN1	P54253	815 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	RPS24	P62847	133 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	SLC6A3	Q01959	620 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	ARID5A	Q03989	594 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	CAMK2G	Q13555	558 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	NCAPH	Q15003	741 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	PTPRN	Q16849	979 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	AASDH	Q4L235	1098 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	SERPINA13P	Q6UXR4	307 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	CHST9	Q7L1S5	443 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	MFN1	Q8IWA4	741 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	DEFB106A	Q8N104	65 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	ATP6V0D2	Q8N8Y2	350 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	NT5C3B	Q969T7	300 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	MYEOV	Q96EZ4	313 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	PRMT1	Q99873	361 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	MKRN2	Q9H000	416 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	HSD3B7	Q9H2F3	369 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	DDIT4	Q9NX09	232 aa		13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	EVL	Q9UI08	416 aa	Predicted RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	NOCT	Q9UK39	431 aa	Known RBP	13.63	□□□□□ -0.23
ERBB2-220	ENST00000584684	CACNA1E	Q15878	2313 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MAP3K13	O43283	966 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	GDF9	O60383	454 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	SYNCRIP	O60506	623 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	LUC7L3	O95232	432 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MOCS2	O96007	188 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ASL	P04424	464 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ATP5B	P06576	529 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ABCB4	P21439	1286 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	CD70	P32970	193 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	NOS2	P35228	1153 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MATK	P42679	507 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	DHPS	P49366	369 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	COPA	P53621	1224 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	NOMO3	P69849	1222 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	TYRO3	Q06418	890 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	CDH18	Q13634	790 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ARID5B	Q14865	1188 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	CCDC6	Q16204	474 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	OTUD1	Q5VV17	481 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	LYSMD4	Q5XG99	296 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MBLAC2	Q68D91	279 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	OR6B2	Q6IFH4	312 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ARC	Q7LC44	396 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	APTX	Q7Z2E3	356 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	NOP9	Q86U38	636 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	CHSY1	Q86X52	802 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	SYT12	Q8IV01	421 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	FRMD1	Q8N878	549 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	KDM1B	Q8NB78	822 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MSANTD4	Q8NCY6	345 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	SORCS1	Q8WY21	1168 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	TTC17	Q96AE7	1141 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	PGAP3	Q96FM1	320 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	ERGIC2	Q96RQ1	377 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	BPIFA3	Q9BQP9	254 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	PRDM16	Q9HAZ2	1276 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	TMEM63C	Q9P1W3	806 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	SLC12A6	Q9UHW9	1150 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	XPO7	Q9UIA9	1087 aa	Known RBP	13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	PLA2G4C	Q9UP65	541 aa		13.62	□□□□□ -0.23
ERBB2-220	ENST00000584684	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	LNP1	A1A4G5	178 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684		F5H5T6	163 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	EPHB6	O15197	1021 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	GRAP2	O75791	330 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	EPHX1	P07099	455 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	POLR2E	P19388	210 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	TACR2	P21452	398 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	SOX5	P35711	763 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	PTGER3	P43115	390 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	KLK7	P49862	253 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	POLR2F	P61218	127 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	RPL6	Q02878	288 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	LMAN2	Q12907	356 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	SYCP1	Q15431	976 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	FNDC3B	Q53EP0	1204 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	RAP1GAP2	Q684P5	730 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	TCEAL6	Q6IPX3	200 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	RABEPK	Q7Z6M1	372 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	XYLT1	Q86Y38	959 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	TMEFF1	Q8IYR6	380 aa		13.61	□□□□□ -0.23
ERBB2-220	ENST00000584684	LGI2	Q8N0V4	545 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms