RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 DDIT4Q9NX09 232 aa17.12■□□□□ 0.33
LIMD2-212ENST00000584645 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
LIMD2-212ENST00000584645 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
LIMD2-212ENST00000584645 PLA2G4CQ9UP65 541 aa17.12■□□□□ 0.33
LIMD2-212ENST00000584645 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
LIMD2-212ENST00000584645 CEP250Q9BV73 2442 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 KCNU1A8MYU2 1149 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 WASH3PC4AMC7 463 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 LUC7L3O95232 432 aaKnown RBP17.11■□□□□ 0.33
LIMD2-212ENST00000584645 C7P10643 843 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 ABCB4P21439 1286 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 TACR2P21452 398 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 HOXD12P35452 270 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 MATKP42679 507 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 DHPSP49366 369 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-212ENST00000584645 JAM2P57087 298 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 NCAPHQ15003 741 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 FUT11Q495W5 492 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 TTC39BQ5VTQ0 682 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-212ENST00000584645 MBLAC2Q68D91 279 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
LIMD2-212ENST00000584645 CHSY1Q86X52 802 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 C18orf8Q96DM3 657 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-212ENST00000584645 STAP1Q9ULZ2 295 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 CEP192Q8TEP8 1941 aa17.11■□□□□ 0.33
LIMD2-212ENST00000584645 WDR87Q6ZQQ6 2873 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 IGHV1OR15-9A0A0B4J2B8 117 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 F5H5T6 163 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 ASLP04424 464 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 DLDP09622 509 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 POLR2EP19388 210 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 PRKCHP24723 683 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 SOX5P35711 763 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 ATXN1P54253 815 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 RPS24P62847 133 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 CDH18Q13634 790 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 SF3A2Q15428 464 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 ERICH1Q86X53 443 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 LGI2Q8N0V4 545 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 KDM1BQ8NB78 822 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 WFDC5Q8TCV5 224 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 SORCS1Q8WY21 1168 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 TTC17Q96AE7 1141 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 SPAG5Q96R06 1193 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 ERGIC2Q96RQ1 377 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 TMEM245Q9H330 911 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 PRDM16Q9HAZ2 1276 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 STIM2Q9P246 746 aa17.1■□□□□ 0.33
LIMD2-212ENST00000584645 USP36Q9P275 1121 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 NOCTQ9UK39 431 aaKnown RBP17.1■□□□□ 0.33
LIMD2-212ENST00000584645 SDK1Q7Z5N4 2213 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 DMXL1Q9Y485 3027 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 GRAP2O75791 330 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 EPHX1P07099 455 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 CD70P32970 193 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 STAT1P42224 750 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 KLK7P49862 253 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 OXCT1P55809 520 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 NOMO3P69849 1222 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 CDR2Q01850 454 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 RPL6Q02878 288 aaKnown RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 LMAN2Q12907 356 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 CAMK2GQ13555 558 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 SYCP1Q15431 976 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 CCDC6Q16204 474 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 PTPRNQ16849 979 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 BRMS1LQ5PSV4 323 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 RABGAP1LQ5R372 815 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 ACBD5Q5T8D3 534 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 PEAR1Q5VY43 1037 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 LYSMD4Q5XG99 296 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 RAP1GAP2Q684P5 730 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 KIAA1324Q6UXG2 1013 aaKnown RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 TRIM72Q6ZMU5 477 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 ARCQ7LC44 396 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 TMEFF1Q8IYR6 380 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 OR2T3Q8NH03 318 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 RNF34Q969K3 372 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 PGAP3Q96FM1 320 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 NPY6RQ99463 290 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 XPO7Q9UIA9 1087 aaKnown RBP17.09■□□□□ 0.33
LIMD2-212ENST00000584645 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
LIMD2-212ENST00000584645 SMTNL1A8MU46 457 aa17.08■□□□□ 0.32
LIMD2-212ENST00000584645 M0QYT0 321 aa17.08■□□□□ 0.32
LIMD2-212ENST00000584645 KHNYNO15037 678 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms