RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 CALR3Q96L12 384 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 SERPINB11Q96P15 392 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 P2RY13Q9BPV8 354 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 SPHK2Q9NRA0 654 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 IP6K2Q9UHH9 426 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 LCMT1Q9UIC8 334 aa16.58■□□□□ 0.24
CSNK1D-223ENST00000584472 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 HMBSP08397 361 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 CHRNB1P11230 501 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 GBP1P32455 592 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 EIF2DP41214 584 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 HARS2P49590 506 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 GRSF1Q12849 480 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 CCINQ13939 588 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 PIGHQ14442 188 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 PPP2R5DQ14738 602 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 ACAP1Q15027 740 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 CDO1Q16878 200 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 SH3PXD2AQ5TCZ1 1133 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 SYNPOQ8N3V7 929 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 ZBTB44Q8NCP5 570 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 FAM172AQ8WUF8 416 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 SPATA6Q9NWH7 488 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 DDIT4Q9NX09 232 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 MARK1Q9P0L2 795 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 TLR6Q9Y2C9 796 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
CSNK1D-223ENST00000584472 KIAA1549LQ6ZVL6 1849 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 PROSCO94903 275 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 F9P00740 461 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 DESP17661 470 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 DRD1P21728 446 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 RDXP35241 583 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 CHKAP35790 457 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 NAP1L1P55209 391 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 HDAC4P56524 1084 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 GAD2Q05329 585 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 DEUP1Q05D60 604 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 NME3Q13232 169 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 MESDQ14696 234 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 NUGGCQ68CJ6 796 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 TMEM25Q86YD3 366 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 UNC45BQ8IWX7 931 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 FAM217AQ8IXS0 508 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 CD101Q93033 1021 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 SLC39A13Q96H72 371 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 KCND1Q9NSA2 647 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 PIGVQ9NUD9 493 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 AGO1Q9UL18 857 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 GUCA1BQ9UMX6 200 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 MYOFQ9NZM1 2061 aa16.56■□□□□ 0.24
CSNK1D-223ENST00000584472 OTOGLQ3ZCN5 2332 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 SYNJ2BP-COX16A0A087WUM0 186 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 BUB1BO60566 1050 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 LRCH4O75427 683 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 RNF8O76064 485 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 MOCS3O95396 460 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 MAN1A1P33908 653 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 OPRD1P41143 372 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 GALK1P51570 392 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 TBX4P57082 545 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 IFI16Q16666 785 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 FSTL4Q6MZW2 842 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 DENND1CQ8IV53 801 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 CPXM2Q8N436 756 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 ARFGAP1Q8N6T3 406 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 KIAA1524Q8TCG1 905 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 AZIN2Q96A70 460 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 LMAN1LQ9HAT1 526 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 TMEM51Q9NW97 253 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 ZSCAN32Q9NX65 697 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 COX16Q9P0S2 106 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 STOML2Q9UJZ1 356 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
CSNK1D-223ENST00000584472 EP300Q09472 2414 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 GRID2IPA4D2P6 1211 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 TMEM110-MUSTN1A8MSY1 372 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 CACNG3O60359 315 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 LILRB5O75023 590 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 CXCR3P49682 368 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 CCR3P51677 355 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 NRLP54845 237 aa16.54■□□□□ 0.24
CSNK1D-223ENST00000584472 ANO4Q32M45 955 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms