RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SPPL2AQ8TCT8 520 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 UBASH3BQ8TF42 649 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 KLHL28Q9NXS3 571 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 EFCAB10A6NFE3 127 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 APOC4-APOC2K7ER74 178 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 APOC2P02655 101 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 IRF1P10914 325 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PABPC1P11940 636 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 YY1P25490 414 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 HOXD10P28358 340 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 NEK3P51956 506 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 CAMK2GQ13555 558 aaPredicted RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 ZNF484Q5JVG2 852 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 RNF148Q8N7C7 305 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 AMER2Q8N7J2 671 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 FNDC5Q8NAU1 212 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PHF21BQ96EK2 531 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 CCDC28BQ9BUN5 200 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ADGRE3Q9BY15 652 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 SALL3Q9BXA9 1300 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 NTSR2O95665 410 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 MYL12AP19105 171 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 OXCT1P55809 520 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 CDH18Q13634 790 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 EPHX4Q8IUS5 362 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ZNF606Q8WXB4 792 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 NUAK2Q9H093 628 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PIF1Q9H611 641 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 DNPEPQ9ULA0 475 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ZNRF3Q9ULT6 936 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ANPEPP15144 967 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 MYL6P60660 151 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PARP6Q2NL67 630 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 OR7A2PQ8NGA2 310 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 ASZ1Q8WWH4 475 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 S100ZQ8WXG8 99 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 CENPIQ92674 756 aaPredicted RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 ACOX2Q99424 681 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 MID1IP1Q9NPA3 183 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
RNF43-208ENST00000584437 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
RNF43-208ENST00000584437 PRRG1O14668 218 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 MYL12BO14950 172 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SUPT20HL2P0C7V6 817 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 KCNJ2P63252 427 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 VPS72Q15906 364 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 TMEM119Q4V9L6 283 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 TMEM132CQ8N3T6 1108 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 CCDC167Q9P0B6 97 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 A0A087X1B8 175 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 RECQL5O94762 991 aaPredicted RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 MT-CO1P00395 513 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ZSCAN18Q8TBC5 510 aaPredicted RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 MGAT1P26572 445 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ADSSP30520 456 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 LRPAP1P30533 357 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SFSWAPQ12872 951 aaKnown RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 ORC1Q13415 861 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SDE2Q6IQ49 451 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 CDC73Q6P1J9 531 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ABRAXAS1Q6UWZ7 409 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ARCQ7LC44 396 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 STARD8Q92502 1023 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 NUDT12Q9BQG2 462 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SNAP91O60641 907 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 STX11O75558 287 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 CCNA2P20248 432 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 KRT74Q7RTS7 529 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 CDK20Q8IZL9 346 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SFRP1Q8N474 314 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 AADATQ8N5Z0 425 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 LENG1Q96BZ8 264 aaPredicted RBP13.32□□□□□ -0.28
RNF43-208ENST00000584437 CDH9Q9ULB4 789 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 SIK3Q9Y2K2 1263 aa13.32□□□□□ -0.28
RNF43-208ENST00000584437 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 PSMD12O00232 456 aaPredicted RBP13.31□□□□□ -0.28
RNF43-208ENST00000584437 RAD51BO15315 384 aa13.31□□□□□ -0.28
RNF43-208ENST00000584437 SYNCRIPO60506 623 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms