RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TRIM66O15016 1216 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 HRO43593 1189 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 LILRB3O75022 631 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 GRAP2O75791 330 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 F9P00740 461 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 GBP1P32455 592 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 CLCN6P51797 869 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 DPYSL2Q16555 572 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 C15orf59Q2T9L4 293 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 MAP9Q49MG5 647 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 AASDHQ4L235 1098 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 SLC39A12Q504Y0 691 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 BEND6Q5SZJ8 279 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 PARM1Q6UWI2 310 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 TMCO3Q6UWJ1 677 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 ANKS1BQ7Z6G8 1248 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 ATL2Q8NHH9 583 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 FGF14Q92915 247 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 SPATA17Q96L03 361 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 PEBP4Q96S96 227 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 ERP44Q9BS26 406 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 VN1R3Q9BXE9 311 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 FAM129AQ9BZQ8 928 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 MAN1C1Q9NR34 630 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
GGA3-217ENST00000583667 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 NAV2Q8IVL1 2488 aa12.39□□□□□ -0.43
GGA3-217ENST00000583667 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 YJEFN3A6XGL0 299 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 E7ENQ6 273 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 NCAM2O15394 837 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 RFPL2O75678 378 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 LTFP02788 710 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 SOD2P04179 222 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 IL4RP24394 825 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 CYP2F1P24903 491 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 ZNF135P52742 658 aaPredicted RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 DR1Q01658 176 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 FOXC1Q12948 553 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 TFDP2Q14188 446 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 SF3A2Q15428 464 aaKnown RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 ODF2Q5BJF6 829 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 TTC27Q6P3X3 843 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 CCDC137Q6PK04 289 aaKnown RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 CCDC50Q8IVM0 306 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 ZNF276Q8N554 614 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 GRK7Q8WTQ7 553 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 SMG7Q92540 1137 aaKnown RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 ZNF707Q96C28 371 aaPredicted RBP12.38□□□□□ -0.43
GGA3-217ENST00000583667 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 DCLK3Q9C098 648 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 FBXO44Q9H4M3 255 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 PCSK1NQ9UHG2 260 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 SCML2Q9UQR0 700 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 LAMA5O15230 3695 aa12.38□□□□□ -0.43
GGA3-217ENST00000583667 PTPRDP23468 1912 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 TOP3BO95985 862 aaKnown RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 IGLV3-25P01717 112 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 USP17L7P0C7H9 530 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 GRIK1P39086 918 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 ATP11AP98196 1134 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 SLC7A5Q01650 507 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 DSG1Q02413 1049 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 GUCY2DQ02846 1103 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 SCAPQ12770 1279 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 NNTQ13423 1086 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 OTUD1Q5VV17 481 aaPredicted RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 SYPL2Q5VXT5 272 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 BSPRYQ5W0U4 402 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 EMBQ6PCB8 327 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 GET4Q7L5D6 327 aaPredicted RBP12.37□□□□□ -0.43
GGA3-217ENST00000583667 TAS1R1Q7RTX1 841 aa12.37□□□□□ -0.43
GGA3-217ENST00000583667 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms