RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ULBP1Q9BZM6 244 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 SGK2Q9HBY8 427 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 PRSS16Q9NQE7 514 aa14.14□□□□□ -0.15
SS18-222ENST00000582792 E9PAM4 449 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 TULP2O00295 520 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 XPO1O14980 1071 aaKnown RBP14.13□□□□□ -0.15
SS18-222ENST00000582792 DFNA5O60443 496 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 RHOBTB3O94955 611 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 SMC2O95347 1197 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 DLDP09622 509 aaKnown RBP14.13□□□□□ -0.15
SS18-222ENST00000582792 RPL13P26373 211 aaKnown RBP14.13□□□□□ -0.15
SS18-222ENST00000582792 BCAT1P54687 386 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 INAVAQ3KP66 663 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 ADGRF1Q5T601 910 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 MBLAC2Q68D91 279 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 ADAT2Q7Z6V5 191 aaKnown RBP14.13□□□□□ -0.15
SS18-222ENST00000582792 SPATA20Q8TB22 786 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 RNF139Q8WU17 664 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 NDRG1Q92597 394 aaKnown RBP14.13□□□□□ -0.15
SS18-222ENST00000582792 GOLGA1Q92805 767 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 GSDMAQ96QA5 445 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 ORAI3Q9BRQ5 295 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 SFMBT1Q9UHJ3 866 aa14.13□□□□□ -0.15
SS18-222ENST00000582792 IGHV4-34P06331 123 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 ATP5BP06576 529 aaKnown RBP14.12□□□□□ -0.15
SS18-222ENST00000582792 MXI1P50539 228 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 SGSHP51688 502 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 ADAM9Q13443 819 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 GOLGA7BQ2TAP0 167 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 CCDC157Q569K6 752 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 MPP7Q5T2T1 576 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 BSPRYQ5W0U4 402 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 ZNF776Q68DI1 518 aaPredicted RBP14.12□□□□□ -0.15
SS18-222ENST00000582792 KIAA0895LQ68EN5 471 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 DHRS13Q6UX07 377 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 TMPRSS12Q86WS5 348 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 GUF1Q8N442 669 aaKnown RBP14.12□□□□□ -0.15
SS18-222ENST00000582792 FBXL13Q8NEE6 735 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 EDEM1Q92611 657 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 RMND1Q9NWS8 449 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 RAB20Q9NX57 234 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 FTSJ1Q9UET6 329 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 SUN2Q9UH99 717 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 MAPK8IP1Q9UQF2 711 aa14.12□□□□□ -0.15
SS18-222ENST00000582792 COL5A1P20908 1838 aaPredicted RBP14.12□□□□□ -0.15
SS18-222ENST00000582792 TP53BP1Q12888 1972 aaPredicted RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 A0A1B0GTQ1 180 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 EIF4E1BA6NMX2 242 aaKnown RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 YJEFN3A6XGL0 299 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 E7ENQ6 273 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 VILLO15195 856 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 PLXNA2O75051 1894 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 PTMSP20962 102 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 RACK1P63244 317 aaKnown RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 IL9RQ01113 521 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 ADIGQ0VDE8 80 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 ZCWPW2Q504Y3 356 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 USP30Q70CQ3 517 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 WFDC5Q8TCV5 224 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 TATDN2Q93075 761 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 CRELD1Q96HD1 420 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 IRX2Q9BZI1 471 aaPredicted RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 RSPH9Q9H1X1 276 aaPredicted RBP14.11□□□□□ -0.15
SS18-222ENST00000582792 ABCC13Q9NSE7 274 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 HESX1Q9UBX0 185 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 SCML1Q9UN30 329 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 NCKAP1Q9Y2A7 1128 aa14.11□□□□□ -0.15
SS18-222ENST00000582792 A0A1W2PPC4 97 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 MSI1O43347 362 aaKnown RBP14.1□□□□□ -0.15
SS18-222ENST00000582792 STX10O60499 249 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 TBL1XO60907 577 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 MBD3O95983 291 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 CD70P32970 193 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 C21orf59P57076 290 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 COBLL1Q53SF7 1204 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 SGO2Q562F6 1265 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 PIK3R6Q5UE93 754 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 RFWD3Q6PCD5 774 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 SIX6OS1Q8N1H7 587 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 SCML4Q8N228 414 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 ZNF557Q8N988 423 aaPredicted RBP14.1□□□□□ -0.15
SS18-222ENST00000582792 KCTD13Q8WZ19 329 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 MYO19Q96H55 970 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 SLC6A18Q96N87 628 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 ELF4Q99607 663 aaPredicted RBP14.1□□□□□ -0.15
SS18-222ENST00000582792 PABPC3Q9H361 631 aaKnown RBP14.1□□□□□ -0.15
SS18-222ENST00000582792 CNGB3Q9NQW8 809 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 ASH1LQ9NR48 2969 aaKnown RBP14.1□□□□□ -0.15
SS18-222ENST00000582792 PCDHGA1Q9Y5H4 931 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 CFAP46Q8IYW2 2715 aa14.1□□□□□ -0.15
SS18-222ENST00000582792 ASXL3Q9C0F0 2248 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 IRAK2O43187 625 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 IGLV3-27P01718 113 aa14.09□□□□□ -0.15
SS18-222ENST00000582792 ABCG1P45844 678 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms