RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CWC15Q9P013 229 aaKnown RBP9.86□□□□□ -0.83
RFFL-210ENST00000582308 DNAI1Q9UI46 699 aa9.86□□□□□ -0.83
RFFL-210ENST00000582308 VANGL2Q9ULK5 521 aa9.86□□□□□ -0.83
RFFL-210ENST00000582308 ZNF510Q9Y2H8 683 aa9.86□□□□□ -0.83
RFFL-210ENST00000582308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.86□□□□□ -0.83
RFFL-210ENST00000582308 WNT6Q9Y6F9 365 aa9.86□□□□□ -0.83
RFFL-210ENST00000582308 IGLV3-10A0A075B6K4 115 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 LRRD1A4D1F6 860 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CTAGE9A4FU28 777 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 E9PAM4 449 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CREB3O43889 395 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 SRGAP2O75044 1071 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ECI2O75521 394 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 LRIG2O94898 1065 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ZRANB2O95218 330 aaKnown RBP eCLIP9.85□□□□□ -0.83
RFFL-210ENST00000582308 IL9P15248 144 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 GOT1P17174 413 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CASQ1P31415 396 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CXCR5P32302 372 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 IRAK1P51617 712 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 SGSHP51688 502 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 VCPP55072 806 aaKnown RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 RWDD2BP57060 319 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 MTA1Q13330 715 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ZNF211Q13398 564 aaPredicted RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 DPYSL3Q14195 570 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 KRT81Q14533 505 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 PDK2Q15119 407 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ZFYVE27Q5T4F4 411 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 PAPD7Q5XG87 772 aaKnown RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 AADACL2Q6P093 401 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 MTSS1LQ765P7 747 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CHSY1Q86X52 802 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ZDHHC14Q8IZN3 488 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 LGI2Q8N0V4 545 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 CPXM2Q8N436 756 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 KIAA1958Q8N8K9 716 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 RSAD2Q8WXG1 361 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 IGSF8Q969P0 613 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 E2F7Q96AV8 911 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 ZFYVE19Q96K21 471 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 RPGRIP1Q96KN7 1286 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 PRICKLE1Q96MT3 831 aaPredicted RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 NAPGQ99747 312 aaPredicted RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 DDX50Q9BQ39 737 aaKnown RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 TBC1D14Q9P2M4 693 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 LIMD1Q9UGP4 676 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 SNX12Q9UMY4 172 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 NEU3Q9UQ49 428 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 NR2E1Q9Y466 385 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 NUMBLQ9Y6R0 609 aa9.85□□□□□ -0.83
RFFL-210ENST00000582308 MYO18AQ92614 2054 aaKnown RBP9.85□□□□□ -0.83
RFFL-210ENST00000582308 DRGXA6NNA5 263 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 F5H5T6 163 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 EEF2KO00418 725 aaKnown RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 KCNK3O14649 394 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 SLC9A3R1O14745 358 aaPredicted RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 TSPAN3O60637 253 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 ARSAP15289 507 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 AMPD1P23109 780 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 HOXC13P31276 330 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 CDKN2BP42772 138 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 HCAR3P49019 387 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 TPI1P60174 286 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 RPS24P62847 133 aaKnown RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 FCHO2Q0JRZ9 810 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 DPYSQ14117 519 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 GRM2Q14416 872 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 LLGL1Q15334 1064 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 EML3Q32P44 896 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 C5orf22Q49AR2 442 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 ANKRD20A8PQ5CZ79 823 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 ACBD5Q5T8D3 534 aaPredicted RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 TRIM68Q6AZZ1 485 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 SPOCD1Q6ZMY3 1216 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 TMEM25Q86YD3 366 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 MAP7D3Q8IWC1 876 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 ADGRG2Q8IZP9 1017 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 CFAP52Q8N1V2 620 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 PLCD3Q8N3E9 789 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 PCDH19Q8TAB3 1148 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 COG1Q8WTW3 980 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 OSCP1Q8WVF1 389 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 FAF2Q96CS3 445 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 OTUB2Q96DC9 234 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 RBM41Q96IZ5 413 aaKnown RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 CSPG4P5Q96PW8 444 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 OSBPL9Q96SU4 736 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 EPAS1Q99814 870 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 FAM83CQ9BQN1 747 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 HERPUD2Q9BSE4 406 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 CALN1Q9BXU9 219 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 CARD9Q9H257 536 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 DUS2Q9NX74 493 aaKnown RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 MPP6Q9NZW5 540 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 THEGQ9P2T0 379 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 FAM50BQ9Y247 325 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 NYNRINQ9P2P1 1898 aaKnown RBP9.84□□□□□ -0.83
RFFL-210ENST00000582308 F5P12259 2224 aa9.84□□□□□ -0.83
RFFL-210ENST00000582308 ATG2BQ96BY7 2078 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms