RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FUBP3Q96I24 572 aaKnown RBP eCLIP23.34■■□□□ 1.33
CCDC47-204ENST00000582252 MRPL9Q9BYD2 267 aaKnown RBP23.34■■□□□ 1.33
CCDC47-204ENST00000582252 SSU72Q9NP77 194 aaKnown RBP23.34■■□□□ 1.33
CCDC47-204ENST00000582252 EIF2B3Q9NR50 452 aaKnown RBP23.34■■□□□ 1.33
CCDC47-204ENST00000582252 MFHAS1Q9Y4C4 1052 aa23.34■■□□□ 1.33
CCDC47-204ENST00000582252 OAZ2O95190 189 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 VAV1P15498 845 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 CREB1P16220 341 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 ERCC2P18074 760 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 IFNAR2P48551 515 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 BTBD8Q5XKL5 378 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 CCNYQ8ND76 341 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 ZCWPW1Q9H0M4 648 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 TMPRSS4Q9NRS4 437 aa23.33■■□□□ 1.33
CCDC47-204ENST00000582252 ZNF638Q14966 1978 aaKnown RBP23.33■■□□□ 1.33
CCDC47-204ENST00000582252 IQANK1A0A1B0GTG1 560 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 TRDMT1O14717 391 aaKnown RBP23.33■■□□□ 1.32
CCDC47-204ENST00000582252 MTSS1O43312 755 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 TADA2AO75478 443 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 METTL18O95568 372 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 CPP00450 1065 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 VIMP08670 466 aaKnown RBP23.33■■□□□ 1.32
CCDC47-204ENST00000582252 MLNP12872 115 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 MX2P20592 715 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 IL9RQ01113 521 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 TAC4Q86UU9 113 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 CAND1Q86VP6 1230 aaKnown RBP23.33■■□□□ 1.32
CCDC47-204ENST00000582252 CKAP2Q8WWK9 683 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 LGMNQ99538 433 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 TKTL2Q9H0I9 626 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 IL23AQ9NPF7 189 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 SAMD15Q9P1V8 674 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 ZC3H7BQ9UGR2 993 aaKnown RBP23.33■■□□□ 1.32
CCDC47-204ENST00000582252 FAM169AQ9Y6X4 670 aa23.33■■□□□ 1.32
CCDC47-204ENST00000582252 RNF103O00237 685 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 HTR7P34969 479 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 SLC5A3P53794 718 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 BRMS1LQ5PSV4 323 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.32■■□□□ 1.322e-6■■■■□ 20.1
CCDC47-204ENST00000582252 COLGALT1Q8NBJ5 622 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 DQX1Q8TE96 717 aaKnown RBP23.32■■□□□ 1.32
CCDC47-204ENST00000582252 ALKBH8Q96BT7 664 aaKnown RBP23.32■■□□□ 1.32
CCDC47-204ENST00000582252 P2RY11Q96G91 374 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 CASD1Q96PB1 797 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 OSBPL2Q9H1P3 480 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 PRDM12Q9H4Q4 367 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 MYO16Q9Y6X6 1858 aa23.32■■□□□ 1.32
CCDC47-204ENST00000582252 TCRBV9S1A1TA0A576 114 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 TRIM66O15016 1216 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 BAIAP3O94812 1187 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 INHBAP08476 426 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 MAGEA3P43357 314 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 PPIGQ13427 754 aaKnown RBP eCLIP23.31■■□□□ 1.321e-10■■□□□ 11.6
CCDC47-204ENST00000582252 PARP6Q2NL67 630 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 SLC39A12Q504Y0 691 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 SYCP2LQ5T4T6 812 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 ANKS4BQ8N8V4 417 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 LRRN4Q8WUT4 740 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 CFAP36Q96G28 342 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 SEC16BQ96JE7 1060 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 MAGEB18Q96M61 343 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 HTATIP2Q9BUP3 242 aa23.31■■□□□ 1.32
CCDC47-204ENST00000582252 IGLV3-25P01717 112 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 AMHP03971 560 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 LRRC14Q15048 493 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 DENND5BQ6ZUT9 1274 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 YTHDF3Q7Z739 585 aaKnown RBP23.3■■□□□ 1.32
CCDC47-204ENST00000582252 IGDCC3Q8IVU1 814 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 CCDC33Q8N5R6 958 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 MRRFQ96E11 262 aaKnown RBP23.3■■□□□ 1.32
CCDC47-204ENST00000582252 CABS1Q96KC9 395 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 OR12D3Q9UGF7 316 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 PRG3Q9Y2Y8 225 aaPredicted RBP23.3■■□□□ 1.32
CCDC47-204ENST00000582252 GOLGA6L7A0A1B0GV03 622 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 F8W810 466 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 FAM72CH0Y354 149 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 IFRD2Q12894 506 aaPredicted RBP23.3■■□□□ 1.32
CCDC47-204ENST00000582252 QPCTQ16769 361 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 FAM72AQ5TYM5 149 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 FAM72DQ6L9T8 149 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 FAM72BQ86X60 149 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 LRRC34Q8IZ02 419 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 C7orf61Q8IZ16 206 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 ARHGAP18Q8N392 663 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 DCAKDQ8WVC6 231 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 SLC44A1Q8WWI5 657 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 SEPT10Q9P0V9 454 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 IGSF9Q9P2J2 1179 aa23.3■■□□□ 1.32
CCDC47-204ENST00000582252 FOXO6A8MYZ6 492 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 TNFRSF10BO14763 440 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 IRAK2O43187 625 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 B4GALT3O60512 393 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 AVILO75366 819 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 COG7P83436 770 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 PPIDQ08752 370 aaKnown RBP23.29■■□□□ 1.32
CCDC47-204ENST00000582252 MTM1Q13496 603 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 SPARCL1Q14515 664 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 EFTUD2Q15029 972 aaKnown RBP eCLIP23.29■■□□□ 1.328e-6■□□□□ 8.1
CCDC47-204ENST00000582252 CCNJLQ8IV13 435 aa23.29■■□□□ 1.32
CCDC47-204ENST00000582252 SCN4BQ8IWT1 228 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms