RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 NCAPHQ15003 741 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 SF3A2Q15428 464 aaKnown RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 MPPE1Q53F39 396 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 C2CD6Q53TS8 623 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 FAM133BQ5BKY9 247 aaKnown RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 PIK3R6Q5UE93 754 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 TAF3Q5VWG9 929 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 OR6B2Q6IFH4 312 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 CHPFQ8IZ52 775 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 DEFB106AQ8N104 65 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 CFAP52Q8N1V2 620 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 C1orf131Q8NDD1 294 aaKnown RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 OLIG1Q8TAK6 271 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 WFDC5Q8TCV5 224 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 HMGB4Q8WW32 186 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 DDX1Q92499 740 aaKnown RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 SLC39A13Q96H72 371 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 CD248Q9HCU0 757 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 POLMQ9NP87 494 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 CD93Q9NPY3 652 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 RXFP3Q9NSD7 469 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 SEMA4GQ9NTN9 838 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 STIM2Q9P246 746 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 MBD1Q9UIS9 605 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 STOML2Q9UJZ1 356 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 CDV3Q9UKY7 258 aaKnown RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 SLC27A6Q9Y2P4 619 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 WASF2Q9Y6W5 498 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 SYNJ2BP-COX16A0A087WUM0 186 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 GOLGA6L22H0YM25 854 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 CAPN9O14815 690 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 TBL1XO60907 577 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 AVPP01185 164 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 CYBBP04839 570 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 HOXB2P14652 356 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 UCHL3P15374 230 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 EEF1GP26641 437 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 HLA-FP30511 346 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 GBP1P32455 592 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 KRT9P35527 623 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 IL12RB1P42701 662 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 COPB1P53618 953 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 YWHAZP63104 245 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 EIF4EBP2Q13542 120 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 ARID5BQ14865 1188 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 NUMA1Q14980 2115 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 PREPLQ4J6C6 727 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 PTPN20Q4JDL3 420 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 USP39Q53GS9 565 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 ZC3H12AQ5D1E8 599 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 CCDC183Q5T5S1 534 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 FAM183BPQ6ZVS7 135 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 NOP9Q86U38 636 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 TAC4Q86UU9 113 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 CYB5D2Q8WUJ1 264 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 GOLGA1Q92805 767 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 GABRG3Q99928 467 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 GANQ9H2C0 597 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 POPDC2Q9HBU9 364 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 NLRC4Q9NPP4 1024 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 ANO10Q9NW15 660 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 ELOVL2Q9NXB9 296 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 COX16Q9P0S2 106 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 CALCOCO1Q9P1Z2 691 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 BCCIPQ9P287 314 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-211ENST00000581536 STON1Q9Y6Q2 735 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 DOCK9Q9BZ29 2069 aa10.08□□□□□ -0.8
TOP3A-211ENST00000581536 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 GFPT2O94808 682 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 EPN2O95208 641 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 TRUB2O95900 331 aaKnown RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 MOCS2O96007 188 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 IGLV3-25P01717 112 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 MMEP08473 750 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 CYP11B1P15538 503 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 CHRNB2P17787 502 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 TFE3P19532 575 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 CD70P32970 193 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 P2RY2P41231 377 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 NUMBP49757 651 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 POLR2FP61218 127 aaKnown RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 RPS24P62847 133 aaKnown RBP10.07□□□□□ -0.8
TOP3A-211ENST00000581536 SLC6A3Q01959 620 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 TYRO3Q06418 890 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 ZNF234Q14588 700 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 STX1AQ16623 288 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 MEA1Q16626 185 aa10.07□□□□□ -0.8
TOP3A-211ENST00000581536 HSF5Q4G112 596 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms