RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TXNDC5Q8NBS9 432 aaKnown RBP13.08□□□□□ -0.32
SNORD55-201ENST00000581525 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
SNORD55-201ENST00000581525 WFIKKN2Q8TEU8 576 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 HAPLN3Q96S86 360 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 WDCPQ9H6R7 721 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 ANLNQ9NQW6 1124 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
SNORD55-201ENST00000581525 ELOVL2Q9NXB9 296 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 LUC7L2Q9Y383 392 aaKnown RBP13.08□□□□□ -0.32
SNORD55-201ENST00000581525 PAXBP1Q9Y5B6 917 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNORD55-201ENST00000581525 R4GN57 208 aa13.08□□□□□ -0.32
SNORD55-201ENST00000581525 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 IGLV3-10A0A075B6K4 115 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 A0A1W2PQF6 199 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 HRO43593 1189 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 TBL1XO60907 577 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 RTN2O75298 545 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 KLF8O95600 359 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 APBB3O95704 486 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 TPM3P06753 285 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 KRT3P12035 628 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 RFC1P35251 1148 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 PLK1P53350 603 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 RNASE9P60153 205 aaKnown RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 NRG1Q02297 640 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 TTC39BQ5VTQ0 682 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 FBXL22Q6P050 247 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 WDR59Q6PJI9 974 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 ADIPOR2Q86V24 386 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 ZNF513Q8N8E2 541 aaPredicted RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 KDM1BQ8NB78 822 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 JOSD2Q8TAC2 188 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 WFDC5Q8TCV5 224 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 RXFP2Q8WXD0 754 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 BHMTQ93088 406 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 METTL5Q9NRN9 209 aaKnown RBP13.07□□□□□ -0.32
SNORD55-201ENST00000581525 TAS2R14Q9NYV8 317 aa13.07□□□□□ -0.32
SNORD55-201ENST00000581525 GOLGA8SH3BPF8 625 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 PAGE1O75459 146 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 SERPING1P05155 500 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 FNTBP49356 437 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 SULT1E1P49888 294 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 SEC13P55735 322 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 RPS24P62847 133 aaKnown RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 DEUP1Q05D60 604 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 NME3Q13232 169 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 AUHQ13825 339 aaKnown RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 RAP1GAP2Q684P5 730 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 SPECC1LQ69YQ0 1117 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 VSTM4Q8IW00 320 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 AHI1Q8N157 1196 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 CCDC33Q8N5R6 958 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 EMC1Q8N766 993 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 NKD2Q969F2 451 aaPredicted RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 ALG14Q96F25 216 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 ACOX2Q99424 681 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 DNAJC7Q99615 494 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 RETREG1Q9H6L5 497 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 GGA2Q9UJY4 613 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 INTS6Q9UL03 887 aaKnown RBP13.06□□□□□ -0.32
SNORD55-201ENST00000581525 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 HS3ST4Q9Y661 456 aa13.06□□□□□ -0.32
SNORD55-201ENST00000581525 A0A1B0GVM2 712 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 TCAF2A6NFQ2 919 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 F5H5T6 163 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 AXIN1O15169 862 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 AP5Z1O43299 807 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 MOCS2O96007 188 aaPredicted RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 LMNAP02545 664 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 PABPC1P11940 636 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 SKILP12757 684 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 CASP14P31944 242 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 RDXP35241 583 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 MRE11P49959 708 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 ZNF143P52747 638 aaPredicted RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 ATXN1P54253 815 aaKnown RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 MAMLD1Q13495 774 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 TRIM14Q14142 442 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 FSCBQ5H9T9 825 aa13.05□□□□□ -0.32
SNORD55-201ENST00000581525 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNORD55-201ENST00000581525 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms