RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ARRDC1-AS1Q9H2J1 176 aa15.38■□□□□ 0.05
SS18-212ENST00000579061 ABCB8Q9NUT2 735 aa15.38■□□□□ 0.05
SS18-212ENST00000579061 GGA2Q9UJY4 613 aa15.38■□□□□ 0.05
SS18-212ENST00000579061 STAP1Q9ULZ2 295 aa15.38■□□□□ 0.05
SS18-212ENST00000579061 MUC22E2RYF6 1773 aaPredicted RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 WASH3PC4AMC7 463 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 CYP1A1P04798 512 aaPredicted RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 ZNF806P0C7X5 589 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ATP1A3P13637 1013 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 NDUFV2P19404 249 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ABCB4P21439 1286 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 TACR2P21452 398 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ID4P47928 161 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ZNF165P49910 485 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 RPS24P62847 133 aaKnown RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 FMO1Q01740 532 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ARID5AQ03989 594 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 PLA2G2CQ5R387 149 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 TTC39BQ5VTQ0 682 aaPredicted RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 PRR23CQ6ZRP0 262 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 ADIPOR2Q86V24 386 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 CHSY1Q86X52 802 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 MFN1Q8IWA4 741 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 CCDC117Q8IWD4 279 aaPredicted RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 LGI2Q8N0V4 545 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 WFDC5Q8TCV5 224 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 NT5C3BQ969T7 300 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 PGAP3Q96FM1 320 aaPredicted RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 LMLNQ96KR4 655 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 NPY6RQ99463 290 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 PRMT1Q99873 361 aaKnown RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.37■□□□□ 0.05
SS18-212ENST00000579061 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 PLA2G4CQ9UP65 541 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 INVSQ9Y283 1065 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 TNRC6BQ9UPQ9 1833 aaKnown RBP15.37■□□□□ 0.05
SS18-212ENST00000579061 GON4LQ3T8J9 2241 aa15.37■□□□□ 0.05
SS18-212ENST00000579061 F5H5T6 163 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 M0QYT0 321 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 LUC7L3O95232 432 aaKnown RBP15.36■□□□□ 0.05
SS18-212ENST00000579061 F9P00740 461 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 ATP5BP06576 529 aaKnown RBP15.36■□□□□ 0.05
SS18-212ENST00000579061 DLDP09622 509 aaKnown RBP15.36■□□□□ 0.05
SS18-212ENST00000579061 CHRNB2P17787 502 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 BCKDHBP21953 392 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 MPLP40238 635 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 PI4KAP42356 2102 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 FAM102AQ5T9C2 384 aaPredicted RBP15.36■□□□□ 0.05
SS18-212ENST00000579061 RAP1GAP2Q684P5 730 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 MBLAC2Q68D91 279 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 SERPINA13PQ6UXR4 307 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 SLC36A4Q6YBV0 504 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 LPCAT2Q7L5N7 544 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 SLC20A1Q8WUM9 679 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 RLN3Q8WXF3 142 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 CPA5Q8WXQ8 436 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 RNF34Q969K3 372 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 MYEOVQ96EZ4 313 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 MRGPRX1Q96LB2 322 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
SS18-212ENST00000579061 DLL3Q9NYJ7 618 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 CALCOCO1Q9P1Z2 691 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 STIM2Q9P246 746 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 RAD54BQ9Y620 910 aa15.36■□□□□ 0.05
SS18-212ENST00000579061 DCHS1Q96JQ0 3298 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 BCLAF3A2AJT9 711 aaKnown RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 MAP3K13O43283 966 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 SYNCRIPO60506 623 aaKnown RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 ASLP04424 464 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 CCDC172P0C7W6 258 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 C7P10643 843 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 POLR2EP19388 210 aaKnown RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 CD70P32970 193 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 DPP6P42658 865 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 CXCR3P49682 368 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 LMAN2Q12907 356 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 CDH18Q13634 790 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 PUM1Q14671 1186 aaKnown RBP eCLIP15.35■□□□□ 0.05
SS18-212ENST00000579061 IQCB1Q15051 598 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 FUT11Q495W5 492 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 FILIP1LQ4L180 1135 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 BRMS1LQ5PSV4 323 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 RABGAP1LQ5R372 815 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 NAA35Q5VZE5 725 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 CARNMT1Q8N4J0 409 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 SORCS1Q8WY21 1168 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 TTC17Q96AE7 1141 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 RMDN1Q96DB5 314 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 TMEM245Q9H330 911 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 FBRSQ9HAH7 460 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 VPS45Q9NRW7 570 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 KIAA1522Q9P206 1035 aaPredicted RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 MBD1Q9UIS9 605 aaPredicted RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 TMEM59LQ9UK28 342 aa15.35■□□□□ 0.05
SS18-212ENST00000579061 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
SS18-212ENST00000579061 SYNJ2BP-COX16A0A087WUM0 186 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms