RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TMEM110Q86TL2 294 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 PIGZQ86VD9 579 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SPATA2LQ8IUW3 424 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF276Q8N554 614 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 TC2NQ8N9U0 490 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SCAMP5Q8TAC9 235 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 UBA3Q8TBC4 463 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 GIPC2Q8TF65 315 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 CLEC4CQ8WTT0 213 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 STK32AQ8WU08 396 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 KCTD13Q8WZ19 329 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SMG7Q92540 1137 aaKnown RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SYN2Q92777 582 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SECISBP2LQ93073 1101 aaKnown RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 CHFRQ96EP1 664 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 P2RY11Q96G91 374 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SMARCD1Q96GM5 515 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 MRFAP1L1Q96HT8 127 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM81BQ96LP2 452 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 ZSWIM3Q96MP5 696 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 LRRC3BQ96PB8 259 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC22A12Q96S37 553 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 CPXM1Q96SM3 734 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 DNAJC7Q99615 494 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 SEPT5Q99719 369 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 APOL5Q9BWW9 433 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 LHX5Q9H2C1 402 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 NMUR1Q9HB89 426 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 DMAP1Q9NPF5 467 aaPredicted RBP3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 CALCOCO1Q9P1Z2 691 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 ARHGAP20Q9P2F6 1191 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 THEGQ9P2T0 379 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 KIAA1257Q9ULG3 409 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 ASB3Q9Y575 518 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 PCDHB4Q9Y5E5 795 aa3.99□□□□□ -1.77
SMARCE1-215ENST00000578995 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SCN8AQ9UQD0 1980 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SPAG17Q6Q759 2223 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CACNA1IQ9P0X4 2223 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 C2orf78A6NCI8 922 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF840PA6NDX5 716 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 YJEFN3A6XGL0 299 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 C2CD4DB7Z1M9 353 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 E7ENQ6 273 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GOLGA6L19H0YKK7 550 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 I6L893 689 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ARNTLO00327 626 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GFRA2O00451 464 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 DDX3XO00571 662 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PRRG1O14668 218 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF263O14978 683 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 THAP12O43422 761 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 AKAP8O43823 692 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GFPT2O94808 682 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SERPINC1P01008 464 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ERBB2P04626 1255 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MMEP08473 750 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM200BP0CF97 657 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SETSIPP0DME0 302 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ESRRAP11474 423 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ACPPP15309 386 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 TCF3P15923 654 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PTPN2P17706 415 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CDK11BP21127 795 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MMP8P22894 467 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CASP14P31944 242 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GDNFP39905 211 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 STAT1P42224 750 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MTHFRP42898 656 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 TUFMP49411 452 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 BCAT1P54687 386 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 DAOAP59103 153 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 YWHAEP62258 255 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 RPL10AP62906 217 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PITX1P78337 314 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZBED6P86452 979 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CYP4F8P98187 520 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CDR2Q01850 454 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF252P-AS1Q0IIN9 211 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 BST2Q10589 180 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PDCLQ13371 301 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PLD1Q13393 1074 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 HTR4Q13639 388 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 RAPGEF1Q13905 1077 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PUM1Q14671 1186 aaKnown RBP eCLIP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 BMS1Q14692 1282 aaKnown RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 STILQ15468 1287 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 GAB4Q2WGN9 574 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MGAT5BQ3V5L5 792 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 LIN9Q5TKA1 542 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 SPECC1LQ69YQ0 1117 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MSANTD2Q6P1R3 559 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 OLFML1Q6UWY5 402 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 DENND5BQ6ZUT9 1274 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 MON1BQ7L1V2 547 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF677Q86XU0 584 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 PHF13Q86YI8 300 aaPredicted RBP3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 CREBRFQ8IUR6 639 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 ZDHHC14Q8IZN3 488 aa3.98□□□□□ -1.77
SMARCE1-215ENST00000578995 NUP93Q8N1F7 819 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms