RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 LSM7Q9UK45 103 aaKnown RBP13.86□□□□□ -0.19
SRSF1-202ENST00000578430 ARHGAP26Q9UNA1 814 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 CPQQ9Y646 472 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 HS3ST4Q9Y661 456 aa13.86□□□□□ -0.19
SRSF1-202ENST00000578430 IGLV3-10A0A075B6K4 115 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 FAM72CH0Y354 149 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 CTIFO43310 598 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 LRIG2O94898 1065 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 GLP2RO95838 553 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 TCF3P15923 654 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 EPHB2P29323 1055 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 SERPINB6P35237 376 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 AVPR1AP37288 418 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 COILP38432 576 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 CCR2P41597 374 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 KCNQ1P51787 676 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 ADCY2Q08462 1091 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 PAFAH1B3Q15102 231 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 LLGL1Q15334 1064 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 FAM72AQ5TYM5 149 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 PIK3R6Q5UE93 754 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 FAM72DQ6L9T8 149 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 TMC5Q6UXY8 1006 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 FAM72BQ86X60 149 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 LZTR1Q8N653 840 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 KIAA1958Q8N8K9 716 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 NOA1Q8NC60 698 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 GRK7Q8WTQ7 553 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 NKD2Q969F2 451 aaPredicted RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 KRT12Q99456 494 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 SLC46A2Q9BY10 475 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 STOML2Q9UJZ1 356 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 DRG1Q9Y295 367 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
SRSF1-202ENST00000578430 NR2E1Q9Y466 385 aa13.85□□□□□ -0.19
SRSF1-202ENST00000578430 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 DRGXA6NNA5 263 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 E9PAM4 449 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 MCF2LO15068 1137 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 DCLK1O15075 740 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 NCAM2O15394 837 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 LIASO43766 372 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 TUBBP07437 444 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 ERCC2P18074 760 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 AMPD1P23109 780 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 CORO1AP31146 461 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 DYNLT1P63172 113 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 XRCC4Q13426 336 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 AUHQ13825 339 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 GRIN2CQ14957 1233 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 NOMO1Q15155 1222 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 TEAD2Q15562 447 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 SLC5A9Q2M3M2 681 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 ADGRF1Q5T601 910 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 NCBP2-AS2Q69YL0 99 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 C8orf74Q6P047 294 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 CCDC137Q6PK04 289 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 SYDE1Q6ZW31 735 aaPredicted RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 CHSY1Q86X52 802 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 KLHL7Q8IXQ5 586 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 ZNF683Q8IZ20 524 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 LRRN4CLQ8ND94 238 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 ATL2Q8NHH9 583 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 SLC35B2Q8TB61 432 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 ACTL9Q8TC94 416 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 RUBCNQ92622 972 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 HAUS1Q96CS2 278 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 TCEAL4Q96EI5 215 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 CYP2S1Q96SQ9 504 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 MAGEB5Q9BZ81 275 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 DDX47Q9H0S4 455 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 GKN1Q9NS71 199 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 R3HDM2Q9Y2K5 976 aaKnown RBP13.84□□□□□ -0.19
SRSF1-202ENST00000578430 MTCH2Q9Y6C9 303 aa13.84□□□□□ -0.19
SRSF1-202ENST00000578430 E2F8A0AVK6 867 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 TARSL2A2RTX5 802 aaKnown RBP13.83□□□□□ -0.2
SRSF1-202ENST00000578430 HACD1B0YJ81 288 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 F5H5T6 163 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 ITGAVP06756 1048 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 RHOQP17081 205 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 GJA1P17302 382 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 MX2P20592 715 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 TACR2P21452 398 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 VCPP55072 806 aaKnown RBP13.83□□□□□ -0.2
SRSF1-202ENST00000578430 NTHL1P78549 312 aa13.83□□□□□ -0.2
SRSF1-202ENST00000578430 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms