RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 CAPN9O14815 690 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 IRAK2O43187 625 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 CCDC172P0C7W6 258 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 UNGP13051 313 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 MMP8P22894 467 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 HOXD12P35452 270 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 HARS2P49590 506 aaKnown RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 TBX4P57082 545 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 RPL6Q02878 288 aaKnown RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 CENPCQ03188 943 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 ARID5AQ03989 594 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 EIF4EBP2Q13542 120 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 NUGGCQ68CJ6 796 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 SYT12Q8IV01 421 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 DENND1CQ8IV53 801 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 CPA5Q8WXQ8 436 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 C18orf8Q96DM3 657 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 SLC39A13Q96H72 371 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 FCRL2Q96LA5 508 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 PCDHB18PQ96TA0 734 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 AGPAT1Q99943 283 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 NUP58Q9BVL2 599 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 ZDHHC4Q9NPG8 344 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 EVLQ9UI08 416 aaPredicted RBP13.27□□□□□ -0.29
CCDC57-211ENST00000578187 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 ITIH6Q6UXX5 1313 aa13.27□□□□□ -0.29
CCDC57-211ENST00000578187 C4orf47A7E2U8 309 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 GFRA2O00451 464 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 TM4SF5O14894 197 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 NPC1O15118 1278 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 KCNK5O95279 499 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 TRUB2O95900 331 aaKnown RBP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 PRKCIP41743 596 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 ATXN3P54252 364 aaPredicted RBP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
CCDC57-211ENST00000578187 STARD3Q14849 445 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 ASIC2Q16515 512 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 TRIM61Q5EBN2 209 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 FYB2Q5VWT5 728 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 PSAPL1Q6NUJ1 521 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 THADAQ6YHU6 1953 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 ARMCX6Q7L4S7 300 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 RNF214Q8ND24 703 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 CEP76Q8TAP6 659 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 BHMTQ93088 406 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 IQCDQ96DY2 449 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 P2RY11Q96G91 374 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 AIPL1Q9NZN9 384 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 CALCOCO1Q9P1Z2 691 aa13.26□□□□□ -0.29
CCDC57-211ENST00000578187 ANTXRLA6NF34 631 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 NDUFS2O75306 463 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 GRAP2O75791 330 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 TPM3P06753 285 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 GABRG2P18507 467 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 NOS2P35228 1153 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 MATKP42679 507 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 WASP42768 502 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 PTP4A2Q12974 167 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 MAP7D1Q3KQU3 841 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 C2CD6Q53TS8 623 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 N4BP2L1Q5TBK1 243 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 MMS22LQ6ZRQ5 1243 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 ARCQ7LC44 396 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 UNC45BQ8IWX7 931 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 GABRG3Q99928 467 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 IRX2Q9BZI1 471 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 FAM204AQ9H8W3 233 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
CCDC57-211ENST00000578187 MUC22E2RYF6 1773 aaPredicted RBP13.25□□□□□ -0.29
CCDC57-211ENST00000578187 NUP205Q92621 2012 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 PLXND1Q9Y4D7 1925 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 FAM170AA1A519 330 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 TRIM24O15164 1050 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 GYPCP04921 128 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 CFIP05156 583 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 PTGER3P43115 390 aa13.24□□□□□ -0.29
CCDC57-211ENST00000578187 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
CCDC57-211ENST00000578187 SLC11A2P49281 568 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms