RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 Q6ZS52 159 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FAM131BQ86XD5 332 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MFN1Q8IWA4 741 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FNIP1Q8TF40 1166 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PRICKLE1Q96MT3 831 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FBXO4Q9UKT5 387 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 A0A1B0GVM2 712 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TCAF2A6NFQ2 919 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 K7EQS6 105 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CCP110O43303 1012 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ADCY5O95622 1261 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CISD3P0C7P0 127 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 COL9A1P20849 921 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PSMA2P25787 234 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CXCL12P48061 93 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RPL7AP62424 266 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RPS24P62847 133 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 AUHQ13825 339 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ANGPT1Q15389 498 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 LRRC31Q6UY01 552 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 USP33Q8TEY7 942 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 EZH1Q92800 747 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HAPLN3Q96S86 360 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PRMT1Q99873 361 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 STIM2Q9P246 746 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 MYO1AQ9UBC5 1043 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 DOCK4Q8N1I0 1966 aa13.14□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NPC1O15118 1278 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 LUC7L3O95232 432 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SGSHP51688 502 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 AIF1P55008 147 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SEC13P55735 322 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 OXCT1P55809 520 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HDAC4P56524 1084 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 GFPT1Q06210 699 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 MESP2Q0VG99 397 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 GAS6Q14393 721 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 EOGTQ5NDL2 527 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 FBXL22Q6P050 247 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CHST9Q7L1S5 443 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 AHI1Q8N157 1196 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TC2NQ8N9U0 490 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PRSS33Q8NF86 280 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 P2RY11Q96G91 374 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 C1orf74Q96LT6 269 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 FAM126AQ9BYI3 521 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SIK2Q9H0K1 926 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NHEJ1Q9H9Q4 299 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 VANGL2Q9ULK5 521 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SLC8A2Q9UPR5 921 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SPAG17Q6Q759 2223 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TMEM191CA6NGB0 347 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 H0Y626 953 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TRIM24O15164 1050 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TIMM44O43615 452 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CLDN11O75508 207 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 RNF8O76064 485 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 MOCS3O95396 460 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 CYP1A2P05177 515 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 HLA-FP30511 346 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ADRA1BP35368 520 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 TIE1P35590 1138 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 KIR2DL1P43626 348 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 GALCP54803 685 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SATB1Q01826 763 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 SCAPQ12770 1279 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 DMC1Q14565 340 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 ZNF528Q3MIS6 628 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 EFHC2Q5JST6 749 aa13.12□□□□□ -0.31
CDK5RAP3-203ENST00000577442 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 299.2 ms