RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 ENAHQ8N8S7 591 aaPredicted RBP5.97□□□□□ -1.45
NUP88-213ENST00000576862 MAGEH1Q9H213 219 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 GRHPRQ9UBQ7 328 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 SLC12A4Q9UP95 1085 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 COMMD10Q9Y6G5 202 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 TLR2O60603 784 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 LARGE1O95461 756 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 RPS13P62277 151 aaKnown RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 AP2B1P63010 937 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 RBM6P78332 1123 aaKnown RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 STIM1Q13586 685 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 SLC9C1Q4G0N8 1177 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 GLE1Q53GS7 698 aaKnown RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 FAM83BQ5T0W9 1011 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 TTC22Q5TAA0 569 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 NFRKBQ6P4R8 1299 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 DHRS13Q6UX07 377 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 ADGRF3Q8IZF5 1079 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 PRSS3P2Q8NHM4 247 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 BCAS4Q8TDM0 211 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 OTUD7AQ8TE49 926 aaPredicted RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 HMGB4Q8WW32 186 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 PRDM16Q9HAZ2 1276 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 MOV10Q9HCE1 1003 aaKnown RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 TUBA8Q9NY65 449 aaPredicted RBP5.96□□□□□ -1.46
NUP88-213ENST00000576862 MTMR4Q9NYA4 1195 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 PI4KBQ9UBF8 816 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 EMSYQ7Z589 1322 aa5.96□□□□□ -1.46
NUP88-213ENST00000576862 MYO15BQ96JP2 1530 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CYP3A7-CYP3A51PA0A087WV96 503 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CNOT3O75175 753 aaKnown RBP5.95□□□□□ -1.46
NUP88-213ENST00000576862 CNTN5O94779 1100 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 SGPL1O95470 568 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CYP3A7P24462 503 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 GRK5P34947 590 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 MMP13P45452 471 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 TRAPPC10P48553 1259 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CDK7P50613 346 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 POLE2P56282 527 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 SHC2P98077 582 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 ID2Q02363 134 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 ANXA2RQ3ZCQ2 193 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 ATPAF1Q5TC12 328 aaPredicted RBP5.95□□□□□ -1.46
NUP88-213ENST00000576862 KLHL17Q6TDP4 642 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 UEVLDQ8IX04 471 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 C16orf52Q8NHV5 167 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 DENND1AQ8TEH3 1009 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CLEC4CQ8WTT0 213 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 CUL5Q93034 780 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 ZNF347Q96SE7 839 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 ARPC5LQ9BPX5 153 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 SCNM1Q9BWG6 230 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 TRIM2Q9C040 744 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 PTPRHQ9HD43 1115 aa5.95□□□□□ -1.46
NUP88-213ENST00000576862 TRNAU1APQ9NX07 287 aaKnown RBP5.95□□□□□ -1.46
NUP88-213ENST00000576862 MOSPD3O75425 235 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 ALDOAP04075 364 aaKnown RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 CYP21A2P08686 494 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 CD63P08962 238 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 AKR1A1P14550 325 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 CHKAP35790 457 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 ZNF569Q5MCW4 686 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 RAB11FIP2Q7L804 512 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 PIP4P1Q86T03 277 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 ARL14EPQ8N8R7 260 aaPredicted RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 PIGOQ8TEQ8 1089 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 ZFPM2Q8WW38 1151 aa5.94□□□□□ -1.46
NUP88-213ENST00000576862 DDX23Q9BUQ8 820 aaKnown RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 SORBS1Q9BX66 1292 aaKnown RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 LIN7CQ9NUP9 197 aaKnown RBP5.94□□□□□ -1.46
NUP88-213ENST00000576862 MBD3L5A6NJ08 208 aaPredicted RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 C3orf70A6NLC5 250 aaPredicted RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 PPEF2O14830 753 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 CYP19A1P11511 503 aaPredicted RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 TFEBP19484 476 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 TGM2P21980 687 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 CPA2P48052 419 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 SLC12A2P55011 1212 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 PGM5Q15124 567 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 RABEP1Q15276 862 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 GALNTL6Q49A17 601 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 ERAP2Q6P179 960 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 SHC4Q6S5L8 630 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 FAM57BQ71RH2 274 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 CCDC117Q8IWD4 279 aaPredicted RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 OR52N4Q8NGI2 321 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 SMG7Q92540 1137 aaKnown RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 ATP2A3Q93084 1043 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 ABHD14AQ9BUJ0 271 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 ABHD16BQ9H3Z7 469 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 ELAC1Q9H777 363 aaKnown RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 ERVK-5Q9HDB9 667 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 C19orf53Q9UNZ5 99 aaPredicted RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 COPG1Q9Y678 874 aaKnown RBP5.93□□□□□ -1.46
NUP88-213ENST00000576862 ZMYM2Q9UBW7 1377 aa5.93□□□□□ -1.46
NUP88-213ENST00000576862 TBC1D3DA0A087WVF3 549 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms