RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 MPP7Q5T2T1 576 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 FOXD4L5Q5VV16 416 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 SLC4A11Q8NBS3 891 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 PIP4K2CQ8TBX8 421 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 FOXD4L4Q8WXT5 416 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 CRELD1Q96HD1 420 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ELF4Q99607 663 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 RSPH9Q9H1X1 276 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ABCC13Q9NSE7 274 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 USP25Q9UHP3 1055 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 FAM47DPA6NHR8 397 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 LRRC72A6NJI9 287 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 YKT6O15498 198 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 IRAK2O43187 625 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 RFPL3O75679 317 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 LDOC1O95751 146 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 ITGAVP06756 1048 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 SLC11A2P49281 568 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 MXI1P50539 228 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 BSPRYQ5W0U4 402 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 FBXL13Q8NEE6 735 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 EDEM1Q92611 657 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 CNDP2Q96KP4 475 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 ORAI3Q9BRQ5 295 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 PABPC3Q9H361 631 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 ASH1LQ9NR48 2969 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 FBXL12Q9NXK8 326 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 SFMBT1Q9UHJ3 866 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
CTDNEP1-212ENST00000576613 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 STX10O60499 249 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 TBL1XO60907 577 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 ASLP04424 464 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 ARRB1P49407 418 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 SEMG2Q02383 582 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 CST6Q15828 149 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 SGO2Q562F6 1265 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 UNC45BQ8IWX7 931 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 BAP1Q92560 729 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 OMDQ99983 421 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 GDF3Q9NR23 364 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 AASDHPPTQ9NRN7 309 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 FZD4Q9ULV1 537 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 AK5Q9Y6K8 562 aa12.11□□□□□ -0.47
CTDNEP1-212ENST00000576613 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 E7ENQ6 273 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 TULP2O00295 520 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 ATXN7O15265 892 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 MSI1O43347 362 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 RNASEH2AO75792 299 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 F13A1P00488 732 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 CD38P28907 300 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 CD70P32970 193 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 EIF2S3P41091 472 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SGSHP51688 502 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 GALCP54803 685 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 YWHAEP62258 255 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 ADAM9Q13443 819 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 HNRNPA1L2Q32P51 320 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SLC45A4Q5BKX6 768 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 NCEH1Q6PIU2 408 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 GUF1Q8N442 669 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 OXR1Q8N573 874 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 HJURPQ8NCD3 748 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 OR2T34Q8NGX1 318 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SAP25Q8TEE9 199 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 KCTD13Q8WZ19 329 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 NDRG1Q92597 394 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-212ENST00000576613 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms