RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 TMA16Q96EY4 203 aaKnown RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 C1orf74Q96LT6 269 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PRICKLE1Q96MT3 831 aaPredicted RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 SNRNP25Q9BV90 132 aaKnown RBP8.86□□□□□ -0.99
NUP88-211ENST00000575976 BBS2Q9BXC9 721 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 TSGA10Q9BZW7 698 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 OSBPL2Q9H1P3 480 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 GOLPH3Q9H4A6 298 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ZWILCHQ9H900 591 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 HEBP1Q9NRV9 189 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PLK2Q9NYY3 685 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MARK1Q9P0L2 795 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 LCMT1Q9UIC8 334 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 VANGL2Q9ULK5 521 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 PYCARDQ9ULZ3 195 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 ALG6Q9Y672 507 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 C5orf42Q9H799 3197 aa8.86□□□□□ -0.99
NUP88-211ENST00000575976 MYO10Q9HD67 2058 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 KIF26AQ9ULI4 1882 aaPredicted RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 GRID2IPA4D2P6 1211 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 NEDD8-MDP1E9PL57 170 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 F5H5T6 163 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 FAM72CH0Y354 149 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 HOXC11O43248 304 aaPredicted RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 KRT86O43790 486 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 TBL1XO60907 577 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 SRGAP2O75044 1071 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 ADH1CP00326 375 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 PENKP01210 267 aaPredicted RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 CYBBP04839 570 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 RARAP10276 462 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 ADH5P11766 374 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 TYRP14679 529 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 COMTP21964 271 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 GJA4P35212 333 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 SLC1A1P43005 524 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 IRAK1P51617 712 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 AIF1P55008 147 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 RPS24P62847 133 aaKnown RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 ZXDAP98168 799 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 SLC25A11Q02978 314 aaKnown RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 SCAPQ12770 1279 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 NR1H3Q13133 447 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 HADHQ16836 314 aaKnown RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 SMTNL2Q2TAL5 461 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 ATP13A4Q4VNC1 1196 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 BOLA3Q53S33 107 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 EFHC2Q5JST6 749 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 KCNT1Q5JUK3 1230 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 FAM72AQ5TYM5 149 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 FYB2Q5VWT5 728 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 FAM72DQ6L9T8 149 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 FAM72BQ86X60 149 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 UBALD2Q8IYN6 164 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 ZNF683Q8IZ20 524 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 NAT16Q8N8M0 369 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 DDI1Q8WTU0 396 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 HSPH1Q92598 858 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 CHFRQ96EP1 664 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 KCTD15Q96SI1 283 aaPredicted RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 PHOX2BQ99453 314 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 DHX35Q9H5Z1 703 aaKnown RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 C8orf33Q9H7E9 229 aaPredicted RBP8.85□□□□□ -0.99
NUP88-211ENST00000575976 LZTFL1Q9NQ48 299 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 STIM2Q9P246 746 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 WNT16Q9UBV4 365 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 CA14Q9ULX7 337 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 GUCA1BQ9UMX6 200 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.85□□□□□ -0.99
NUP88-211ENST00000575976 USP34Q70CQ2 3546 aa8.85□□□□□ -0.99
NUP88-211ENST00000575976 IGLV3-10A0A075B6K4 115 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 KRBA1A5PL33 1030 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 SHISA7A6NL88 538 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 DRGXA6NNA5 263 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 E9PAM4 449 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 SPECC1L-ADORA2AF8WAN1 911 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 SPOPO43791 374 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 GFRA3O60609 400 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 PALMO75781 387 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 LRIG2O94898 1065 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 TNNT1P13805 278 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 HOXD9P28356 352 aaPredicted RBP8.84□□□□□ -0.99
NUP88-211ENST00000575976 L1CAMP32004 1257 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 CTHP32929 405 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 GJC1P36383 396 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 OPRD1P41143 372 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 SLC6A11P48066 632 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 NRG1Q02297 640 aaPredicted RBP8.84□□□□□ -0.99
NUP88-211ENST00000575976 MLF2Q15773 248 aaPredicted RBP8.84□□□□□ -0.99
NUP88-211ENST00000575976 IFI16Q16666 785 aaKnown RBP8.84□□□□□ -0.99
NUP88-211ENST00000575976 C5orf22Q49AR2 442 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 ALFQ53S48 1182 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 MPP7Q5T2T1 576 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 ACBD5Q5T8D3 534 aaPredicted RBP8.84□□□□□ -0.99
NUP88-211ENST00000575976 MANEALQ5VSG8 457 aa8.84□□□□□ -0.99
NUP88-211ENST00000575976 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms