RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 DGKEP52429 567 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 RPS24P62847 133 aaKnown RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 CENPCQ03188 943 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 EIF4EBP2Q13542 120 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 LPAL2Q16609 132 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 MS4A13Q5J8X5 152 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 OTUD1Q5VV17 481 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 WDR5BQ86VZ2 330 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 MFN1Q8IWA4 741 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 LGI2Q8N0V4 545 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 CFAP52Q8N1V2 620 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 ACOX2Q99424 681 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 SLC2A11Q9BYW1 496 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TPSD1Q9BZJ3 242 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 CIPCQ9C0C6 399 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TTYH3Q9C0H2 523 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 CACNA2D2Q9NY47 1150 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 CALCOCO1Q9P1Z2 691 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 SLC12A6Q9UHW9 1150 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 STARD13Q9Y3M8 1113 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 KCNU1A8MYU2 1149 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 F5H5T6 163 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 AXIN1O15169 862 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 HRO43593 1189 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 GJB6O95452 261 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 HOXB2P14652 356 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 HLA-FP30511 346 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 NTSR1P30989 418 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 GSDMDP57764 484 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 DEUP1Q05D60 604 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 SDE2Q6IQ49 451 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 TRNP1Q6NT89 227 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 CEP68Q76N32 757 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 IRF2BP2Q7Z5L9 587 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 CARNMT1Q8N4J0 409 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 EMC1Q8N766 993 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 SUMF1Q8NBK3 374 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 WFDC5Q8TCV5 224 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 UCMAQ8WVF2 138 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 CPLX3Q8WVH0 158 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 CFAP57Q96MR6 1250 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 TBCBQ99426 244 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 NPY6RQ99463 290 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 PIGVQ9NUD9 493 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 RRN3Q9NYV6 651 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 BCCIPQ9P287 314 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
RPAIN-216ENST00000575599 MYO18AQ92614 2054 aaKnown RBP13.72□□□□□ -0.21
RPAIN-216ENST00000575599 NRDCO43847 1150 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.21
RPAIN-216ENST00000575599 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CALB1P05937 261 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 TNFAIP3P21580 790 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CNR2P34972 360 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 GGCXP38435 758 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 PBX1P40424 430 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CDH18Q13634 790 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 SLC25A52Q3SY17 297 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 MPP7Q5T2T1 576 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 PHF13Q86YI8 300 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CCDC117Q8IWD4 279 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-216ENST00000575599 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 HMGB4Q8WW32 186 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 SORCS1Q8WY21 1168 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 IRX2Q9BZI1 471 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-216ENST00000575599 TKTL2Q9H0I9 626 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 HAUS4Q9H6D7 363 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 RAB23Q9ULC3 237 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 RAD54BQ9Y620 910 aa13.71□□□□□ -0.21
RPAIN-216ENST00000575599 CCDC163A0A0D9SF12 145 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 TMCO5BA8MYB1 307 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 WASH3PC4AMC7 463 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 AKR1B15C9JRZ8 316 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 PAGE1O75459 146 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 LUC7L3O95232 432 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 CD70P32970 193 aa13.71□□□□□ -0.22
RPAIN-216ENST00000575599 ATXN1P54253 815 aaKnown RBP13.71□□□□□ -0.22
RPAIN-216ENST00000575599 ATP11AP98196 1134 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms