RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 DRAP1Q14919 205 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 EFHC1Q5JVL4 640 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 RAP1GAP2Q684P5 730 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ADIPOR2Q86V24 386 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 RGL4Q8IZJ4 473 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 LGI2Q8N0V4 545 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ZNF557Q8N988 423 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 DDX1Q92499 740 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 MYEOVQ96EZ4 313 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 SIPA1Q96FS4 1042 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 IRX2Q9BZI1 471 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 VPS16Q9H269 839 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 LHX5Q9H2C1 402 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 DDIT4Q9NX09 232 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 XPO7Q9UIA9 1087 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 H0Y626 953 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 HSF2BPO75031 334 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 ERBB2P04626 1255 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 TACR2P21452 398 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 CD6P30203 668 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 DPP6P42658 865 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 MAPK8P45983 427 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 COPAP53621 1224 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 TYRO3Q06418 890 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 LMAN2Q12907 356 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 NME3Q13232 169 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 KRT31Q15323 416 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 ATP6V0D2Q8N8Y2 350 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 TOE1Q96GM8 510 aaKnown RBP13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 PILRBQ9UKJ0 227 aa13.16□□□□□ -0.3
NPLOC4-213ENST00000573519 MEI4A8MW99 385 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 KCNU1A8MYU2 1149 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 F5H5T6 163 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 GLI1P08151 1106 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 UCHL3P15374 230 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 CYP11B1P15538 503 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 ABCB4P21439 1286 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 CCR1P32246 355 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 KLK7P49862 253 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 TPMTP51580 245 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 RNASE9P60153 205 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 ST8SIA6P61647 398 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC6A3Q01959 620 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 PTPRNQ16849 979 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 PTPN20Q4JDL3 420 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 SYCP2LQ5T4T6 812 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 DAB2IPQ5VWQ8 1189 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 MMS22LQ6ZRQ5 1243 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 KIAA0907Q7Z7F0 614 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM124AQ86V42 546 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC41A1Q8IVJ1 513 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 FIBINQ8TAL6 211 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 GTPBP2Q9BX10 602 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 GPR174Q9BXC1 333 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM245Q9H330 911 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 FSCN3Q9NQT6 498 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 ITM2CQ9NQX7 267 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 EVLQ9UI08 416 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-213ENST00000573519 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.31
NPLOC4-213ENST00000573519 DAB1O75553 588 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 LUC7L3O95232 432 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 MOCS3O95396 460 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 IGLV3-25P01717 112 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 SLC2A3P11169 496 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 ENGP17813 658 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 CSKP41240 450 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 NUMBP49757 651 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 ATXN3P54252 364 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 MYL5Q02045 173 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 DUOXA1Q1HG43 343 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 FSCBQ5H9T9 825 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
NPLOC4-213ENST00000573519 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms