RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 TPSD1Q9BZJ3 242 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 HAUS4Q9H6D7 363 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 AIPL1Q9NZN9 384 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 BCCIPQ9P287 314 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHMP6-204ENST00000572778 GGA2Q9UJY4 613 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 KIAA1549LQ6ZVL6 1849 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 ATG2BQ96BY7 2078 aa21.4■■□□□ 1.02
CHMP6-204ENST00000572778 WASH3PC4AMC7 463 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 TIMM44O43615 452 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 RPP40O75818 363 aaKnown RBP21.39■■□□□ 1.01
CHMP6-204ENST00000572778 GJB6O95452 261 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 PABPC1P11940 636 aaKnown RBP21.39■■□□□ 1.01
CHMP6-204ENST00000572778 PBX1P40424 430 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 CXCR3P49682 368 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 MTA1Q13330 715 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 TMEM215Q68D42 235 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 ACAD10Q6JQN1 1059 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 TRNP1Q6NT89 227 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 PGBD3Q8N328 593 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 MDGA1Q8NFP4 955 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 WFIKKN2Q8TEU8 576 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 HMGB4Q8WW32 186 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 GAB3Q8WWW8 586 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 PGAP3Q96FM1 320 aaPredicted RBP21.39■■□□□ 1.01
CHMP6-204ENST00000572778 PRMT1Q99873 361 aaKnown RBP21.39■■□□□ 1.01
CHMP6-204ENST00000572778 TKTL2Q9H0I9 626 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 SIK2Q9H0K1 926 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 DMDP11532 3685 aa21.39■■□□□ 1.01
CHMP6-204ENST00000572778 H0Y626 953 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 PAGE1O75459 146 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 ADCY5O95622 1261 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 TPM3P06753 285 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 CD70P32970 193 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 ATXN1P54253 815 aaKnown RBP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 C1QBPQ07021 282 aaKnown RBP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 KLHL30Q0D2K2 578 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 CDH18Q13634 790 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 E2F5Q15329 346 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 BRMS1LQ5PSV4 323 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 E4F1Q66K89 784 aaPredicted RBP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 RNF43Q68DV7 783 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 MON1BQ7L1V2 547 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 ARCQ7LC44 396 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 RASSF3Q86WH2 238 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 AHI1Q8N157 1196 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 JOSD2Q8TAC2 188 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 FIBINQ8TAL6 211 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 CPLX3Q8WVH0 158 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 RXFP2Q8WXD0 754 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 SORCS1Q8WY21 1168 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 GABRG3Q99928 467 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 SYT11Q9BT88 431 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 SELENOOQ9BVL4 669 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 XPO4Q9C0E2 1151 aaKnown RBP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 THAP10Q9P2Z0 257 aaPredicted RBP21.38■■□□□ 1.01
CHMP6-204ENST00000572778 NCDNQ9UBB6 729 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 INVSQ9Y283 1065 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 PAXBP1Q9Y5B6 917 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 RAD54BQ9Y620 910 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 STON1Q9Y6Q2 735 aa21.38■■□□□ 1.01
CHMP6-204ENST00000572778 TMCO5BA8MYB1 307 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ZBTB24O43167 697 aaPredicted RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 LUC7L3O95232 432 aaKnown RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 KRT3P12035 628 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 SKILP12757 684 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 PDGFRAP16234 1089 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 RDXP35241 583 aaKnown RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 GGCXP38435 758 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ATP11AP98196 1134 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 AUHQ13825 339 aaKnown RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ZNF234Q14588 700 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 USP39Q53GS9 565 aaKnown RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 RABGAP1LQ5R372 815 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 MBLAC2Q68D91 279 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 FBXL22Q6P050 247 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ZNF571Q7Z3V5 609 aaPredicted RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 RUBCNQ92622 972 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 RPRD1AQ96P16 312 aaPredicted RBP21.37■■□□□ 1.01
CHMP6-204ENST00000572778 TMEM51Q9NW97 253 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ARHGEF38Q9NXL2 777 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 VANGL2Q9ULK5 521 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 HS3ST4Q9Y661 456 aa21.37■■□□□ 1.01
CHMP6-204ENST00000572778 ZFHX2Q9C0A1 2572 aaPredicted RBP21.36■■□□□ 1.01
CHMP6-204ENST00000572778 A0A1W2PQF6 199 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 A0A1W2PQJ5 194 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 NPC1O15118 1278 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 POLR2EP19388 210 aaKnown RBP21.36■■□□□ 1.01
CHMP6-204ENST00000572778 SDC4P31431 198 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 PRKCIP41743 596 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 IL12RB1P42701 662 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 LMAN2Q12907 356 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 CDO1Q16878 200 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 FSCBQ5H9T9 825 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 KIAA1211LQ6NV74 962 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 DNAJC24Q6P3W2 148 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 KIAA0907Q7Z7F0 614 aaPredicted RBP21.36■■□□□ 1.01
CHMP6-204ENST00000572778 ADIPOR2Q86V24 386 aa21.36■■□□□ 1.01
CHMP6-204ENST00000572778 CIR1Q86X95 450 aaPredicted RBP21.36■■□□□ 1.01
CHMP6-204ENST00000572778 FAM131BQ86XD5 332 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms