RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 NFKBIZQ9BYH8 718 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 WDR11Q9BZH6 1224 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PAIP1Q9H074 479 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 NAT10Q9H0A0 1025 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 DPH5Q9H2P9 285 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 EPS8L2Q9H6S3 715 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ZMAT3Q9HA38 289 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 SLC38A10Q9HBR0 1119 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 KCNMB3Q9NPA1 279 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 RPRD1BQ9NQG5 326 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 ADARB2Q9NS39 739 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 FKBP14Q9NWM8 211 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 UCKL1Q9NWZ5 548 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 IMPACTQ9P2X3 320 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 MBD2Q9UBB5 411 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 NXF1Q9UBU9 619 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 LRWD1Q9UFC0 647 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 SALL4Q9UJQ4 1053 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 CPSF3Q9UKF6 684 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 VAV3Q9UKW4 847 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 BAG5Q9UL15 447 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 TDRD15B5MCY1 1934 aaKnown RBP3.69□□□□□ -1.82
SMG6-208ENST00000570874 RPTORQ8N122 1335 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 PITPNM2Q9BZ72 1349 aa3.69□□□□□ -1.82
SMG6-208ENST00000570874 ZNF236Q9UL36 1845 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CYP3A7-CYP3A51PA0A087WV96 503 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 CCDC151A5D8V7 595 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TMEM150BA6NC51 233 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NCF1BA6NI72 391 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZNF891A8MT65 544 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 NCF1CA8MVU1 366 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 PRR5-ARHGAP8B1AHC4 643 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 E7EVH7 732 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 H0YCG3 227 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 GCOM1H8Y6P7 765 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 LAD1O00515 517 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TRDMT1O14717 391 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 KHNYNO15037 678 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SCAMP1O15126 338 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CASC3O15234 703 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 TEX33O43247 280 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 PRODHO43272 600 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CHMP2AO43633 222 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 GAS7O60861 476 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RNGTTO60942 597 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 PHACTR2O75167 634 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TBX10O75333 385 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 BEST1O76090 585 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 UBXN7O94888 489 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ECDO95905 644 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 KRT14P02533 472 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CHRNA1P02708 482 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CYP3A4P08684 503 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ENO2P09104 434 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SLC10A3P09131 477 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TPBGLP0DKB5 382 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 SPATA31C1P0DKV0 1188 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZBTB48P10074 688 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 HSPA8P11142 646 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 KRT5P13647 590 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 PRG2P13727 222 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 GCFC2P16383 781 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 ZNF18P17022 549 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ITGB5P18084 799 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 EIF2AK2P19525 551 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 PRKACBP22694 351 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CYP3A7P24462 503 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 NFKBIAP25963 317 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TLX1P31314 330 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 CIITAP33076 1130 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TXLNAP40222 546 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MLH1P40692 756 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 DPP6P42658 865 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 HSPA7P48741 367 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MAPKAPK2P49137 400 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 HSD17B4P51659 736 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 GDF10P55107 478 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 ADKP55263 362 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 FCGRTP55899 365 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 DSTNP60981 165 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RPS6P62753 249 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 YWHAZP63104 245 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 CSNK2BP67870 215 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 TPM4P67936 248 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 MRPS9P82933 396 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 MYL5Q02045 173 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 C17orf67Q0P5P2 114 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 C19orf57Q0VDD7 668 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 EPS8Q12929 822 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 RPA4Q13156 261 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 CTTNQ14247 550 aaKnown RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 LRRC32Q14392 662 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 HABP2Q14520 560 aaPredicted RBP3.68□□□□□ -1.82
SMG6-208ENST00000570874 PUM1Q14671 1186 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMG6-208ENST00000570874 TMEM132BQ14DG7 1078 aa3.68□□□□□ -1.82
SMG6-208ENST00000570874 EFTUD2Q15029 972 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMG6-208ENST00000570874 SMAD2Q15796 467 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms