RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CCR1P32246 355 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 GBP1P32455 592 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 CD70P32970 193 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 TRNP1Q6NT89 227 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 CHST9Q7L1S5 443 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 ADIPOR2Q86V24 386 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 MFN1Q8IWA4 741 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 LGI2Q8N0V4 545 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 AHI1Q8N157 1196 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
CNOT1-220ENST00000569916 ATP6V0D2Q8N8Y2 350 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 MSANTD4Q8NCY6 345 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 RLN3Q8WXF3 142 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 PRMT1Q99873 361 aaKnown RBP13.5□□□□□ -0.25
CNOT1-220ENST00000569916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.25
CNOT1-220ENST00000569916 STIM2Q9P246 746 aa13.5□□□□□ -0.25
CNOT1-220ENST00000569916 ABCA7Q8IZY2 2146 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PTPRZ1P23471 2315 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 A0A1B0GTH6 734 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 GOLGA8SH3BPF8 625 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 M0QYT0 321 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 TIMM44O43615 452 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 LUC7L3O95232 432 aaKnown RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 UNGP13051 313 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 ABCB4P21439 1286 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 MMP8P22894 467 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PRKCHP24723 683 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 FLT3P36888 993 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 SULT1E1P49888 294 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 RNASE9P60153 205 aaKnown RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 LMAN2Q12907 356 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 NME3Q13232 169 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 ELF2Q15723 593 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 FUT11Q495W5 492 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PMS2CLQ68D20 193 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 TRIM72Q6ZMU5 477 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 MMS22LQ6ZRQ5 1243 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 C11orf74Q86VG3 221 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PGBD3Q8N328 593 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 CARNMT1Q8N4J0 409 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 FRMD1Q8N878 549 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 ZNF557Q8N988 423 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 FIBINQ8TAL6 211 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 NT5C3BQ969T7 300 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 SPACA7Q96KW9 195 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 NAP1L5Q96NT1 182 aaPredicted RBP13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PCDHB18PQ96TA0 734 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 RRN3Q9NYV6 651 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 STAP1Q9ULZ2 295 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 DMXL1Q9Y485 3027 aa13.49□□□□□ -0.25
CNOT1-220ENST00000569916 F5H5T6 163 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 RHOBTB1O94844 696 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 CENPCQ03188 943 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 ARID5AQ03989 594 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 PTP4A2Q12974 167 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 CDH18Q13634 790 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 E2F5Q15329 346 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 PTPRNQ16849 979 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 FSCBQ5H9T9 825 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 MBLAC2Q68D91 279 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 SERPINA13PQ6UXR4 307 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 ARCQ7LC44 396 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 SLC30A5Q8TAD4 765 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 CYB5D2Q8WUJ1 264 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 BAP1Q92560 729 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 RNF34Q969K3 372 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 PGAP3Q96FM1 320 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-220ENST00000569916 MRGPRX1Q96LB2 322 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 TBCBQ99426 244 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
CNOT1-220ENST00000569916 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 MBD1Q9UIS9 605 aaPredicted RBP13.48□□□□□ -0.25
CNOT1-220ENST00000569916 INTS6Q9UL03 887 aaKnown RBP13.48□□□□□ -0.25
CNOT1-220ENST00000569916 PCDHGA5Q9Y5G8 931 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 DOCK4Q8N1I0 1966 aa13.48□□□□□ -0.25
CNOT1-220ENST00000569916 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 I6L893 689 aaPredicted RBP13.47□□□□□ -0.25
CNOT1-220ENST00000569916 PAGE1O75459 146 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 ADCY5O95622 1261 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 DLDP09622 509 aaKnown RBP13.47□□□□□ -0.25
CNOT1-220ENST00000569916 HLA-EP13747 358 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 GGCXP38435 758 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 MPLP40238 635 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 CXCR3P49682 368 aa13.47□□□□□ -0.25
CNOT1-220ENST00000569916 ATXN1P54253 815 aaKnown RBP13.47□□□□□ -0.25
CNOT1-220ENST00000569916 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms