RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GRHPRQ9UBQ7 328 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 IGSF9BQ9UPX0 1349 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 C15orf38-AP3S2A0A0A6YYH1 394 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 F8W8V4 182 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 TPP1O14773 563 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 HNRNPDLO14979 420 aaKnown RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 CALUO43852 315 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 N4BP1O75113 896 aaKnown RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 KLHL2O95198 593 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 FAM153BP0C7A2 387 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ZNF865P0CJ78 1059 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 GNSP15586 552 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PRKACBP22694 351 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 RPP38P78345 283 aaKnown RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 SPAG1Q07617 926 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 SV2CQ496J9 727 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ZNF362Q5T0B9 420 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 NT5DC1Q5TFE4 455 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PKN3Q6P5Z2 889 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 RNF149Q8NC42 400 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 METTL21AQ8WXB1 218 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 CDKL2Q92772 493 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PAGE5Q96GU1 130 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ACCSQ96QU6 501 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 KCNK17Q96T54 332 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 COQ7Q99807 217 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NCOR1P1Q9H4R4 102 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 C8orf33Q9H7E9 229 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 ASAH2Q9NR71 780 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMG1-217ENST00000569764 CAB39Q9Y376 341 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 TARSL2A2RTX5 802 aaKnown RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 FAM86C2PA6NEL3 165 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 A6NHS1 94 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NFIBO00712 420 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 SLC37A4O43826 429 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 CKMT1AP12532 417 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 TAGLN2P37802 199 aaKnown RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 AARSP49588 968 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMG1-217ENST00000569764 PRIM2P49643 509 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 KIAA0319Q5VV43 1072 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PLPP4Q5VZY2 271 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 UNC45BQ8IWX7 931 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 BBS5Q8N3I7 341 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NDEL1Q9GZM8 345 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PALMDQ9NP74 551 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 NMRK1Q9NWW6 199 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 ASH2LQ9UBL3 628 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 POLHQ9Y253 713 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 PRG3Q9Y2Y8 225 aaPredicted RBP6.86□□□□□ -1.31
SMG1-217ENST00000569764 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
SMG1-217ENST00000569764 hCG_1807616A0A1W2PRN6 198 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZNF263O14978 683 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 RHOBTB1O94844 696 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 IL18RAPO95256 599 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 KRT19P08727 400 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ARF4P18085 180 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 UBA1P22314 1058 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 IRS1P35568 1242 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ERVK-21P61565 698 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 COG7P83436 770 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PRKCEQ02156 737 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 Q3ZCU0 254 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TLDC1Q6P9B6 456 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 AAGABQ6PD74 315 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SLC30A10Q6XR72 485 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZDHHC17Q8IUH5 632 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 FAM20CQ8IXL6 584 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 TCAIMQ8N3R3 496 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 CPA6Q8N4T0 437 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZNF527Q8NB42 609 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 OR56B2PQ8NGI1 322 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 KIAA1143Q96AT1 154 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 SCLYQ96I15 445 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 SLC2A13Q96QE2 648 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 XPO6Q96QU8 1125 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 PHF7Q9BWX1 381 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 TXNRD2Q9NNW7 524 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 CD93Q9NPY3 652 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 A8MV72 311 aaPredicted RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 RRP8O43159 456 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 LRRN2O75325 713 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PRKCBP05771 671 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 POU2F2P09086 479 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 RPL9P32969 192 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 DCAF7P61962 342 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PSMC6P62333 389 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 RAD51Q06609 339 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 PEX6Q13608 980 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 HNRNPDQ14103 355 aaKnown RBP6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZNF460Q14592 562 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 ZNF423Q2M1K9 1284 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 FAM26DQ5JW98 314 aa6.85□□□□□ -1.31
SMG1-217ENST00000569764 GPR158Q5T848 1215 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms