RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 FAM124AQ86V42 546 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 ZCCHC9Q8N567 271 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 OR2T3Q8NH03 318 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 MRGPRX3Q96LB0 322 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 SLC4A5Q9BY07 1137 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 IL21RQ9HBE5 538 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 PRSS16Q9NQE7 514 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 PTPRBP23467 1997 aa14.39□□□□□ -0.11
GTF3C1-211ENST00000569653 NBEAQ8NFP9 2946 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 METTL12A8MUP2 240 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 E5RJQ4 531 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 SYNCRIPO60506 623 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 IGLV3-25P01717 112 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 RPS14P62263 151 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 EIF4EBP2Q13542 120 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 STILQ15468 1287 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 CAMK4Q16566 473 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 DCAF12L1Q5VU92 463 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 TRIM65Q6PJ69 517 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 RGL4Q8IZJ4 473 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 WDTC1Q8N5D0 677 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 WFIKKN2Q8TEU8 576 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 ZNF606Q8WXB4 792 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 PRCCQ92733 491 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 SCNM1Q9BWG6 230 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 C6orf106Q9H6K1 298 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 SIX2Q9NPC8 291 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 UBE2TQ9NPD8 197 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 DNAAF2Q9NVR5 837 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 STIM2Q9P246 746 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 ITPR1Q14643 2758 aa14.38□□□□□ -0.11
GTF3C1-211ENST00000569653 ANKRD11Q6UB99 2663 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 TIMM44O43615 452 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 HYAL3O43820 417 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 FBXO21O94952 628 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 KRT5P13647 590 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 CTSOP43234 321 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 MS4A13Q5J8X5 152 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 MPP7Q5T2T1 576 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 NUGGCQ68CJ6 796 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 DPY19L2P1Q6NXN4 242 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 CADM4Q8NFZ8 388 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 GATA6Q92908 595 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 FOXJ1Q92949 421 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 AZIN2Q96A70 460 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 FAM149B1Q96BN6 582 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 ORAI3Q9BRQ5 295 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 KIAA1468Q9P260 1216 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 EIF2B4Q9UI10 523 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 KLK13Q9UKR3 277 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 TLR6Q9Y2C9 796 aa14.37□□□□□ -0.11
GTF3C1-211ENST00000569653 MEI4A8MW99 385 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 SH3BP5O60239 455 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 OPHN1O60890 802 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 GNA14O95837 355 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 MOCS2O96007 188 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 PROS1P07225 676 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 CSKP41240 450 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 SLC11A2P49281 568 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 NUMBP49757 651 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 IRAK1P51617 712 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 ZNF445P59923 1031 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 PDCLQ13371 301 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 DCAF6Q58WW2 860 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 ZC3H12AQ5D1E8 599 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 UNQ6494/PRO21346Q6UXR6 183 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 TMEM110Q86TL2 294 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 HJURPQ8NCD3 748 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 FIBINQ8TAL6 211 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 CPXM1Q96SM3 734 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 ADAM33Q9BZ11 813 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 MIR1-1HGQ9H1L0 117 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 LHX5Q9H2C1 402 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 SERGEFQ9UGK8 458 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 RALYQ9UKM9 306 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 FNDC3AQ9Y2H6 1198 aaKnown RBP14.36□□□□□ -0.11
GTF3C1-211ENST00000569653 A0A1B0GTW7 788 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 C10orf142B7Z368 130 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 IRAK2O43187 625 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 ATXN3P54252 364 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 CETN1Q12798 172 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 NNTQ13423 1086 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
GTF3C1-211ENST00000569653 WDR45BQ5MNZ6 344 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms