RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 KLHDC7BQ96G42 594 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 TCEANC2Q96MN5 208 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 NTPCRQ9BSD7 190 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CDH19Q9H159 772 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 ASB7Q9H672 318 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 EPB41L5Q9HCM4 733 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 LATS2Q9NRM7 1088 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 DPP3Q9NY33 737 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 SUN2Q9UH99 717 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 PLA2G4CQ9UP65 541 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 GTF3C3Q9Y5Q9 886 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 FLNAP21333 2647 aaKnown RBP6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 CACNA1CQ13936 2221 aa6.95□□□□□ -1.3
HERPUD1-217ENST00000569429 VPS13CQ709C8 3753 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 AKAP6Q13023 2319 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC12A8A0AV02 714 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 C9orf172C9J069 976 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 STMND1H3BQB6 276 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 K7EM74 188 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CASC3O15234 703 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 OGTO15294 1046 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC16A4O15374 487 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 HCRTO43612 131 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 HUS1O60921 280 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 ATP2C2O75185 946 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 RTN3O95197 1032 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 LIFP15018 202 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 ITIH1P19827 911 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 YWHAQP27348 245 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 RPA1P27694 616 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CDC25AP30304 524 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 ATP1A2P50993 1020 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 ADPRHP54922 357 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 GOLGA8FQ08AF8 430 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 GOLGA8DPQ0D2H9 430 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 HDAC1Q13547 482 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 FGL2Q14314 439 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 NECTIN1Q15223 517 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 NR0B2Q15466 257 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 FNDC3BQ53EP0 1204 aaKnown RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 Q6ZNB5 142 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 ASB18Q6ZVZ8 466 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CCDC13Q8IYE1 715 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 NUP93Q8N1F7 819 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SPDYE1Q8NFV5 336 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 OR6B3Q8NGW1 331 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 USP7Q93009 1102 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 NAT6Q93015 286 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 FBXO32Q969P5 355 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 FAM212AQ96EL1 285 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC45A3Q96JT2 553 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM74Q96NL1 305 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 MDFIQ99750 246 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC2A11Q9BYW1 496 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 SLC29A3Q9BZD2 475 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CRTAC1Q9NQ79 661 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CHORDC1Q9UHD1 332 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CDH9Q9ULB4 789 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 NAP1L2Q9ULW6 460 aaPredicted RBP6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 LOXL2Q9Y4K0 774 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 CSNK1G3Q9Y6M4 447 aa6.94□□□□□ -1.3
HERPUD1-217ENST00000569429 FAM92AA1XBS5 289 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 PRAMEF26H0Y7S4 382 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 MKRN2OSH3BPM6 223 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TPP1O14773 563 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 MID1O15344 667 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 NEBLO76041 1014 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 NADKO95544 446 aaPredicted RBP6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 MUTP22033 750 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 PTGER4P35408 488 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 CHKAP35790 457 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 ETV5P41161 510 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TXKP42681 527 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 HDAC4P56524 1084 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 HNRNPKP61978 463 aaKnown RBP eCLIP6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 PPP2CBP62714 309 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 PPP2CAP67775 309 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 CALCRLQ16602 461 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 NUGGCQ68CJ6 796 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 SND1Q7KZF4 910 aaKnown RBP eCLIP6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TMPRSS9Q7Z410 1059 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 TMEM161BQ8NDZ6 487 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 GTF3C6Q969F1 213 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 PCED1BQ96HM7 432 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 OMDQ99983 421 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 NACA2Q9H009 215 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 GDAP2Q9NXN4 497 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 IL37Q9NZH6 218 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 KCNG1Q9UIX4 513 aa6.93□□□□□ -1.3
HERPUD1-217ENST00000569429 CPSF3Q9UKF6 684 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms