RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 PSMA5P28066 241 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 UQCRFS1P47985 274 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 ZNF174Q15697 407 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 MANEAQ5SRI9 462 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 FHL5Q5TD97 284 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 IQCHQ86VS3 1027 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 FAM184AQ8NB25 1140 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 RSPH9Q9H1X1 276 aaPredicted RBP11.77□□□□□ -0.53
CDH3-208ENST00000569036 NEUROG2Q9H2A3 272 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 USP29Q9HBJ7 922 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 TUBD1Q9UJT1 453 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 SCML1Q9UN30 329 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
CDH3-208ENST00000569036 CSMD2Q7Z408 3487 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 A0A1W2PP55 124 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 PP2D1A8MPX8 630 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 CTDNEP1O95476 244 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 ALPPL2P10696 532 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 PDX1P52945 283 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 PPP2CBP62714 309 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 PPP2CAP67775 309 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 RBP5P82980 135 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 BORAQ6PGQ7 559 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 WASF1Q92558 559 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 B3GNT5Q9BYG0 378 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 DPEP3Q9H4B8 488 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 CAAP1Q9H8G2 361 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 NLGN3Q9NZ94 848 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 ZKSCAN5Q9Y2L8 839 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 STYXL1Q9Y6J8 313 aa11.76□□□□□ -0.53
CDH3-208ENST00000569036 NYNRINQ9P2P1 1898 aaKnown RBP11.76□□□□□ -0.53
CDH3-208ENST00000569036 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 PLD2O14939 933 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 MDM4O15151 490 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 MID1O15344 667 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 LATO43561 262 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 MAGEC1O60732 1142 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 TCEA3O75764 348 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 RNASEH2AO75792 299 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 STC2O76061 302 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 KLKB1P03952 638 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 SCP2P22307 547 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 ATP5C1P36542 298 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 HARS2P49590 506 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 ANAPC15P60006 121 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 OVGP1Q12889 678 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 ORC2Q13416 577 aaPredicted RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 C1QL3Q5VWW1 255 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 MAMDC2Q7Z304 686 aaPredicted RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 CACTINQ8WUQ7 758 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 GTF3C6Q969F1 213 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 INTS4Q96HW7 963 aaKnown RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 SLC2A11Q9BYW1 496 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 MTG2Q9H4K7 406 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 ZNF71Q9NQZ8 489 aaPredicted RBP11.75□□□□□ -0.53
CDH3-208ENST00000569036 LMBRD1Q9NUN5 540 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 SEPT10Q9P0V9 454 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 SEL1LQ9UBV2 794 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 FZD4Q9ULV1 537 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 PLA2G4CQ9UP65 541 aa11.75□□□□□ -0.53
CDH3-208ENST00000569036 HIVEP3Q5T1R4 2406 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 CASC3O15234 703 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 SEMA7AO75326 666 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 PIAS2O75928 621 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 KRT7P08729 469 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 PTPN1P18031 435 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 ADPRHP54922 357 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 SLC12A3P55017 1021 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 EHHADHQ08426 723 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 SFSWAPQ12872 951 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 CDKN3Q16667 212 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 KRT79Q5XKE5 535 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 SLFN12LQ6IEE8 588 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 GUSBP11Q6P575 273 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 CRTC1Q6UUV9 634 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 EFL1Q7Z2Z2 1120 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 ZC3H18Q86VM9 953 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 ZC3H3Q8IXZ2 948 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 SYT2Q8N9I0 419 aaPredicted RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 MRPL45Q9BRJ2 306 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 MMTAG2Q9BU76 263 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 MTMR12Q9C0I1 747 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 ZMYND15Q9H091 742 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 IKZF4Q9H2S9 585 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 TLR8Q9NR97 1041 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 OSER1Q9NX31 292 aa11.74□□□□□ -0.53
CDH3-208ENST00000569036 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
CDH3-208ENST00000569036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms