RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 MACROD2A1Z1Q3 448 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 TYW5A2RUC4 315 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 KRT86O43790 486 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 TBL1XO60907 577 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 IL1R2P27930 398 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 CTHP32929 405 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 SLC1A1P43005 524 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 RPS24P62847 133 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 NRG1Q02297 640 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 SLC25A11Q02978 314 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 PRKCQQ04759 706 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 IFI16Q16666 785 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 MPP7Q5T2T1 576 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 LRRC31Q6UY01 552 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 ZNF662Q6ZS27 426 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 TPRG1Q6ZUI0 275 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 ZNF683Q8IZ20 524 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 CFAP52Q8N1V2 620 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 IGSF8Q969P0 613 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 CHFRQ96EP1 664 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 RPRD1AQ96P16 312 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 XPO6Q96QU8 1125 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
COMMD4-224ENST00000568877 ZWILCHQ9H900 591 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 GPATCH2LQ9NWQ4 482 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 ALG6Q9Y672 507 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 COL4A2P08572 1712 aa17.3■□□□□ 0.36
COMMD4-224ENST00000568877 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 KRBA1A5PL33 1030 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 E9PAM4 449 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 CACNG3O60359 315 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 SRGAP2O75044 1071 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 COMTP21964 271 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 HOXD9P28356 352 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-224ENST00000568877 L1CAMP32004 1257 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 TAS2R40P59535 323 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 SIGLEC14Q08ET2 396 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 C5orf22Q49AR2 442 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 ARTNQ5T4W7 220 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-224ENST00000568877 TXNRD3NBQ6F5E7 133 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 C11orf63Q6NUN7 778 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 ETFBKMTQ8IXQ9 262 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 SIX5Q8N196 739 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 PYROXD2Q8N2H3 581 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 RNF10Q8N5U6 811 aaKnown RBP17.29■□□□□ 0.36
COMMD4-224ENST00000568877 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 SHDQ96IW2 340 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 COL25A1Q9BXS0 654 aaPredicted RBP17.29■□□□□ 0.36
COMMD4-224ENST00000568877 STIM2Q9P246 746 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 TICRRQ7Z2Z1 1910 aa17.29■□□□□ 0.36
COMMD4-224ENST00000568877 IGLV3-10A0A075B6K4 115 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 DRGXA6NNA5 263 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 PI4K2BG5E9Z4 385 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 FAM72CH0Y354 149 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 MAN2B1O00754 1011 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 SPOPO43791 374 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 MOCS3O95396 460 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 RARAP10276 462 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 OPRD1P41143 372 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 EIF2DP41214 584 aaKnown RBP17.28■□□□□ 0.36
COMMD4-224ENST00000568877 SLC6A11P48066 632 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 CA9Q16790 459 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 SMTNL2Q2TAL5 461 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 KCNT1Q5JUK3 1230 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 FAM72AQ5TYM5 149 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 MANEALQ5VSG8 457 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 RNF43Q68DV7 783 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 FAM72DQ6L9T8 149 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 TXNDC11Q6PKC3 985 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 DAAM2Q86T65 1068 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 C12orf40Q86WS4 652 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 FAM72BQ86X60 149 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 FAM3CQ92520 227 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 HSPH1Q92598 858 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 GOLPH3Q9H4A6 298 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 DHX35Q9H5Z1 703 aaKnown RBP17.28■□□□□ 0.36
COMMD4-224ENST00000568877 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 PPARGC1AQ9UBK2 798 aaKnown RBP17.28■□□□□ 0.36
COMMD4-224ENST00000568877 GUCA1BQ9UMX6 200 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 HYOU1Q9Y4L1 999 aa17.28■□□□□ 0.36
COMMD4-224ENST00000568877 GRID2IPA4D2P6 1211 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 SHISA7A6NL88 538 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-224ENST00000568877 TNFRSF10AO00220 468 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 TULP3O75386 442 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 LRIG2O94898 1065 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 KRT7P08729 469 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 GALK1P51570 392 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 IRAK1P51617 712 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 STARD6P59095 220 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 SEMA3BQ13214 749 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.36
COMMD4-224ENST00000568877 ZNF852Q6ZMS4 543 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 TRIM67Q6ZTA4 783 aa17.27■□□□□ 0.36
COMMD4-224ENST00000568877 CIR1Q86X95 450 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms