RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 CD70P32970 193 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 NOS2P35228 1153 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 KLK7P49862 253 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 MTA1Q13330 715 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 PTPRNQ16849 979 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 ZNF677Q86XU0 584 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 C12orf50Q8NA57 414 aaPredicted RBP30.45■■■□□ 2.47
RAB40C-211ENST00000568586 PRMT1Q99873 361 aaKnown RBP30.45■■■□□ 2.47
RAB40C-211ENST00000568586 MKRN2Q9H000 416 aaKnown RBP30.45■■■□□ 2.47
RAB40C-211ENST00000568586 SYNCQ9H7C4 482 aa30.45■■■□□ 2.47
RAB40C-211ENST00000568586 CKAP5Q14008 2032 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 NUP205Q92621 2012 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 LGALS16A8MUM7 142 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 DLDP09622 509 aaKnown RBP30.44■■■□□ 2.46
RAB40C-211ENST00000568586 PRKCHP24723 683 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 CCR1P32246 355 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 TYRO3Q06418 890 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 MBLAC2Q68D91 279 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 MFN1Q8IWA4 741 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 ATP6V0D2Q8N8Y2 350 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 ANKRD20A12PQ8NF67 263 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 NT5C3BQ969T7 300 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 TTC17Q96AE7 1141 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 SMOC1Q9H4F8 434 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 FAM204AQ9H8W3 233 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 DDIT4Q9NX09 232 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 RRN3Q9NYV6 651 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 SLC12A6Q9UHW9 1150 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 NOCTQ9UK39 431 aaKnown RBP30.44■■■□□ 2.46
RAB40C-211ENST00000568586 PLA2G4CQ9UP65 541 aa30.44■■■□□ 2.46
RAB40C-211ENST00000568586 GON4LQ3T8J9 2241 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 TYW5A2RUC4 315 aaKnown RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 EPHB6O15197 1021 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 GRAP2O75791 330 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 MOCS2O96007 188 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 TACR2P21452 398 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 MATKP42679 507 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 PTGER3P43115 390 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 DHPSP49366 369 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 COPAP53621 1224 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 CAMK2GQ13555 558 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 PEAR1Q5VY43 1037 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 SERPINA13PQ6UXR4 307 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 CYP2U1Q7Z449 544 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 TMEFF1Q8IYR6 380 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 C18orf8Q96DM3 657 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 SLC6A17Q9H1V8 727 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 PDCL3Q9H2J4 239 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 RXFP3Q9NSD7 469 aa30.43■■■□□ 2.46
RAB40C-211ENST00000568586 FAM207AQ9NSI2 230 aaPredicted RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 USP36Q9P275 1121 aaKnown RBP30.43■■■□□ 2.46
RAB40C-211ENST00000568586 AP5Z1O43299 807 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 SYNCRIPO60506 623 aaKnown RBP30.42■■■□□ 2.46
RAB40C-211ENST00000568586 ATP5BP06576 529 aaKnown RBP30.42■■■□□ 2.46
RAB40C-211ENST00000568586 DPP6P42658 865 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 POLR2FP61218 127 aaKnown RBP30.42■■■□□ 2.46
RAB40C-211ENST00000568586 ARID5AQ03989 594 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 AASDHQ4L235 1098 aaPredicted RBP30.42■■■□□ 2.46
RAB40C-211ENST00000568586 ERICH1Q86X53 443 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 ERGIC2Q96RQ1 377 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 NPY6RQ99463 290 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 PRDM16Q9HAZ2 1276 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 ITM2CQ9NQX7 267 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 TMEM51Q9NW97 253 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 STIM2Q9P246 746 aa30.42■■■□□ 2.46
RAB40C-211ENST00000568586 INTS6Q9UL03 887 aaKnown RBP30.42■■■□□ 2.46
RAB40C-211ENST00000568586 MUC22E2RYF6 1773 aaPredicted RBP30.41■■■□□ 2.46
RAB40C-211ENST00000568586 NCOR2Q9Y618 2525 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 LUC7L3O95232 432 aaKnown RBP30.41■■■□□ 2.46
RAB40C-211ENST00000568586 IGLV3-19P01714 112 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 HOXD12P35452 270 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 SOX5P35711 763 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 NOMO3P69849 1222 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 LMAN2Q12907 356 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 SYCP1Q15431 976 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 OTUD1Q5VV17 481 aaPredicted RBP30.41■■■□□ 2.46
RAB40C-211ENST00000568586 TAF3Q5VWG9 929 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 RAP1GAP2Q684P5 730 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 XYLT1Q86Y38 959 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 TMPRSS6Q8IU80 811 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 SYT12Q8IV01 421 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 LGI2Q8N0V4 545 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 CFAP52Q8N1V2 620 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 CYB5D2Q8WUJ1 264 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 PGAP3Q96FM1 320 aaPredicted RBP30.41■■■□□ 2.46
RAB40C-211ENST00000568586 BPIFA3Q9BQP9 254 aa30.41■■■□□ 2.46
RAB40C-211ENST00000568586 EVLQ9UI08 416 aaPredicted RBP30.41■■■□□ 2.46
RAB40C-211ENST00000568586 TNRC6BQ9UPQ9 1833 aaKnown RBP30.4■■■□□ 2.46
RAB40C-211ENST00000568586 TM4SF5O14894 197 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 EPHX1P07099 455 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 MMEP08473 750 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 POLR2EP19388 210 aaKnown RBP30.4■■■□□ 2.46
RAB40C-211ENST00000568586 ABCB4P21439 1286 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 CDR2Q01850 454 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 RPL6Q02878 288 aaKnown RBP30.4■■■□□ 2.46
RAB40C-211ENST00000568586 FSCBQ5H9T9 825 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 TCEAL6Q6IPX3 200 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 ARCQ7LC44 396 aa30.4■■■□□ 2.46
RAB40C-211ENST00000568586 CHSY1Q86X52 802 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms