RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ELOVL2Q9NXB9 296 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 CHMP5Q9NZZ3 219 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 EVLQ9UI08 416 aaPredicted RBP10.8□□□□□ -0.68
LINC00564-201ENST00000567258 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 CYP8B1Q9UNU6 501 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 RAD54BQ9Y620 910 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 STON1Q9Y6Q2 735 aa10.8□□□□□ -0.68
LINC00564-201ENST00000567258 A0A1W2PQF6 199 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 LNP1A1A4G5 178 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 THAP12O43422 761 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ZIC2O95409 532 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ATP5BP06576 529 aaKnown RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 EPHX1P07099 455 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 NCAM1P13591 858 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 GNSP15586 552 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 BMP6P22004 513 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 USP8P40818 1118 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 MTIF2P46199 727 aaKnown RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 TBX4P57082 545 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 SNX16P57768 344 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 IRX4P78413 519 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 GFPT1Q06210 699 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ZNF33AQ06730 810 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ARID5BQ14865 1188 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 GEN1Q17RS7 908 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 UAP1L1Q3KQV9 507 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 FNDC3BQ53EP0 1204 aaKnown RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 DESI1Q6ICB0 168 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 KIAA1211LQ6NV74 962 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 GBP6Q6ZN66 633 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 FAM114A1Q8IWE2 563 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 HDDC3Q8N4P3 179 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 FRMD1Q8N878 549 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 LMO3Q8TAP4 145 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 WFIKKN2Q8TEU8 576 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 TFAP2BQ92481 460 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 PRCCQ92733 491 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 SERPINB11Q96P15 392 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 LSM14BQ9BX40 385 aaKnown RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 THAP10Q9P2Z0 257 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 SUSD2Q9UGT4 822 aa10.79□□□□□ -0.68
LINC00564-201ENST00000567258 MBD1Q9UIS9 605 aaPredicted RBP10.79□□□□□ -0.68
LINC00564-201ENST00000567258 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 IGHV1OR15-9A0A0B4J2B8 117 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MEI4A8MW99 385 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 PATE3B3GLJ2 98 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 WASH3PC4AMC7 463 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 IRAK2O43187 625 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MSI1O43347 362 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 SYPP08247 313 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 POLR2EP19388 210 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 ITPKAP23677 461 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 OXTRP30559 389 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 GNA15P30679 374 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 PTGER3P43115 390 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 GSK3AP49840 483 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 NOVA1P51513 510 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 RING1Q06587 406 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 ZNF234Q14588 700 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 FUT11Q495W5 492 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 WDR45BQ5MNZ6 344 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MSANTD2Q6P1R3 559 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 FAM217AQ8IXS0 508 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 AHI1Q8N157 1196 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 DEFB119Q8N690 84 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 KAT5Q92993 513 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 SIPA1Q96FS4 1042 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 PIWIL1Q96J94 861 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MRGPRX1Q96LB2 322 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 HSPA12BQ96MM6 686 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 NOX5Q96PH1 765 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 MED15Q96RN5 788 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 SLC32A1Q9H598 525 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 SLC12A6Q9UHW9 1150 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 PILRBQ9UKJ0 227 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 SLC6A14Q9UN76 642 aa10.78□□□□□ -0.68
LINC00564-201ENST00000567258 ATXN2Q99700 1313 aaKnown RBP10.78□□□□□ -0.68
LINC00564-201ENST00000567258 PES1O00541 588 aaKnown RBP10.77□□□□□ -0.69
LINC00564-201ENST00000567258 ACSL4O60488 711 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 TBL1XO60907 577 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 KCNK5O95279 499 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 MOCS3O95396 460 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 APOEP02649 317 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 CD6P30203 668 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 IL12RB1P42701 662 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 MAPK8P45983 427 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 ST8SIA6P61647 398 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 ARHGAP44Q17R89 818 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 MPP7Q5T2T1 576 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 PSAPL1Q6NUJ1 521 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 SLC23A3Q6PIS1 610 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 TRIM65Q6PJ69 517 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 CHST9Q7L1S5 443 aa10.77□□□□□ -0.69
LINC00564-201ENST00000567258 BHLHA9Q7RTU4 235 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms