RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 NR1H2P55055 460 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 TFAMQ00059 246 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 C15orf59Q2T9L4 293 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 FAM83AQ86UY5 434 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 ACO2Q99798 780 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 MRPL4Q9BYD3 311 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 TMEM216Q9P0N5 145 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 THEGQ9P2T0 379 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 NXF1Q9UBU9 619 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF510Q9Y2H8 683 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 CTDP1Q9Y5B0 961 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 B4GALT4O60513 344 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 PFDN1O60925 122 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 TNNC2P02585 160 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 FAM58BPP0C7Q3 252 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 GRIA1P42261 906 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 OLFML2BQ68BL8 750 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 C16orf89Q6UX73 402 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF410Q86VK4 478 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 UNC5BQ8IZJ1 945 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 CNDP1Q96KN2 507 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 LENG8Q96PV6 779 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 PLEKHG4BQ96PX9 1271 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 TWNKQ96RR1 684 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 ELOVL4Q9GZR5 314 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 COG4Q9H9E3 785 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 DDX18Q9NVP1 670 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 G3BP2Q9UN86 482 aaKnown RBP16.1■□□□□ 0.17
COMMD4-215ENST00000566843 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 GJA3Q9Y6H8 435 aa16.1■□□□□ 0.17
COMMD4-215ENST00000566843 ADCY6O43306 1168 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 TOMM70O94826 608 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 THRAP10827 490 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 SLC5A2P31639 672 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 EFNA5P52803 228 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 DGKZQ13574 1117 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 TARBP2Q15633 366 aaKnown RBP16.09■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF423Q2M1K9 1284 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 AGBL3Q8NEM8 1001 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 CDKL2Q92772 493 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 TBCBQ99426 244 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF670Q9BS34 389 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 PDZD7Q9H5P4 517 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 GPATCH2LQ9NWQ4 482 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 MTMR10Q9NXD2 777 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 SLC17A6Q9P2U8 582 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 BCAP29Q9UHQ4 241 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
COMMD4-215ENST00000566843 CEPT1Q9Y6K0 416 aa16.09■□□□□ 0.17
COMMD4-215ENST00000566843 PRSS51A0A1B0GVH4 220 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 WDR27A2RRH5 827 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CCDC160A6NGH7 325 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CPA3P15088 417 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 YBX3P16989 372 aaKnown RBP eCLIP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 DESP17661 470 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 MX2P20592 715 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CDH8P55286 799 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 DCTN2Q13561 401 aaKnown RBP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 PRKG1Q13976 671 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CCDC153Q494R4 210 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CCDC14Q49A88 953 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 SLC9B1Q4ZJI4 515 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 PIGGQ5H8A4 983 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF667Q5HYK9 610 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 LILRA2Q8N149 483 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 GFM2Q969S9 779 aaKnown RBP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 ANKRD36BP1Q96IX9 119 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CNBD2Q96M20 576 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 TCHPQ9BT92 498 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 CNOT11Q9UKZ1 510 aaKnown RBP16.08■□□□□ 0.17
COMMD4-215ENST00000566843 ANK1P16157 1881 aa16.08■□□□□ 0.17
COMMD4-215ENST00000566843 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 M0QYV0 167 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 VWA5AO00534 786 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 CILPO75339 1184 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 ATP6V1B1P15313 513 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 PIK3R1P27986 724 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 PCSK6P29122 969 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 MAGEA12P43365 314 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 SERPINB8P50452 374 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 ADARP55265 1226 aaKnown RBP16.08■□□□□ 0.16
COMMD4-215ENST00000566843 GK3PQ14409 553 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 NUP93Q8N1F7 819 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 DLG3Q92796 817 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 ISL2Q96A47 359 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 TMEM176AQ96HP8 235 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
COMMD4-215ENST00000566843 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 E9PBE3 544 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 FZD9O00144 591 aa16.07■□□□□ 0.16
COMMD4-215ENST00000566843 MDM4O15151 490 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms