RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GBA2Q9HCG7 927 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 XPNPEP3Q9NQH7 507 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 EHD2Q9NZN4 543 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 KCND2Q9NZV8 630 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 AKAP7Q9P0M2 348 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 AGTPBP1Q9UPW5 1226 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PTRH2Q9Y3E5 179 aaKnown RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 MTF2Q9Y483 593 aaPredicted RBP3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 PCDHA10Q9Y5I2 948 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 TRPV2Q9Y5S1 764 aa3.56□□□□□ -1.84
HERPUD1-211ENST00000566550 HECW2Q9P2P5 1572 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 KDM3AQ9Y4C1 1321 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3DA0A087WVF3 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3IA0A087WXS9 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3EA0A087X179 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3KA0A087X1G2 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ARHGEF37A1IGU5 675 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 C2orf78A6NCI8 922 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3BA6NDS4 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3FA6NER0 549 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 OR2W5A6NFC9 320 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 A8MXE2 369 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 BTBD18B2RXH4 712 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3LB9A6J9 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 DDX39AO00148 427 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 POLRMTO00411 1230 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TP73O15350 636 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 FMO6PO60774 539 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PSMD10O75832 226 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 MPOP05164 745 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ITGB1P05556 798 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RB1P06400 928 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 C8BP07358 591 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3HP0C7X1 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 KRT10P13645 584 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ACP5P13686 325 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CPT2P23786 658 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC6A2P23975 617 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TTKP33981 857 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PNPLA4P41247 253 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 MC3RP41968 323 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CD86P42081 329 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 KIR2DL3P43628 341 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PXNP49023 591 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF134P52741 427 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 EPHB3P54753 998 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RRP1P56182 461 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 EVCP57679 992 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 BPIFB4P59827 614 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 UFM1P61960 85 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RPL7AP62424 266 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SMAD4Q13485 552 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 BFSP2Q13515 415 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TNFAIP1Q13829 316 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 NR1I3Q14994 352 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 NTRK2Q16620 822 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC9B1Q4ZJI4 515 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PARP10Q53GL7 1025 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 KRTCAP3Q53RY4 240 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM196Q5HYL7 178 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM47AQ5JRC9 791 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PLEKHS1Q5SXH7 462 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 GKAP1Q5VSY0 366 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3GQ6DHY5 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3CQ6IPX1 549 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TATDN1Q6P1N9 297 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TAF2Q6P1X5 1199 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 IYDQ6PHW0 289 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 NCEH1Q6PIU2 408 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ZC3H14Q6PJT7 736 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PIWIL3Q7Z3Z3 882 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RPAINQ86UA6 219 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 LDHDQ86WU2 507 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 METTL23Q86XA0 190 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ADGRF2Q8IZF7 708 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D3Q8IZP1 549 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF619Q8N2I2 560 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 POC5Q8NA72 575 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 POGLUT1Q8NBL1 392 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SYT8Q8NBV8 401 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 MAFAQ8NHW3 353 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 DEPDC1BQ8WUY9 529 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SMARCE1Q969G3 411 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ARRDC3Q96B67 414 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 INTS12Q96CB8 462 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 SAT2Q96F10 170 aaPredicted RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CABS1Q96KC9 395 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RPL10LQ96L21 214 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL15Q96M94 604 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 RUNDC3BQ96NL0 473 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CLIC6Q96NY7 704 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 WDFY2Q96P53 400 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 PPP1R10Q96QC0 940 aaKnown RBP3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CD180Q99467 661 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 ANP32EQ9BTT0 268 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 TLR10Q9BXR5 811 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM129AQ9BZQ8 928 aa3.55□□□□□ -1.84
HERPUD1-211ENST00000566550 CTDSP1Q9GZU7 261 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms