RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 STRIP2Q9ULQ0 834 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 ZNF462Q96JM2 2506 aa13.97□□□□□ -0.17
COMMD4-214ENST00000566230 BICDL2A1A5D9 508 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 EIF4E1BA6NMX2 242 aaKnown RBP13.96□□□□□ -0.17
COMMD4-214ENST00000566230 PAPSS1O43252 624 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-214ENST00000566230 FSBPO95073 299 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 PRB1P04280 392 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 IGHV4-34P06331 123 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 BMP6P22004 513 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 ITPKBP27987 946 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 GCLMP48507 274 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 IL9RQ01113 521 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 ARID5AQ03989 594 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 MPPE1Q53F39 396 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 PM20D1Q6GTS8 502 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 CHST9Q7L1S5 443 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 RSRC2Q7L4I2 434 aaKnown RBP13.96□□□□□ -0.17
COMMD4-214ENST00000566230 FAM186BQ8IYM0 893 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 ARHGAP18Q8N392 663 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 HEXIM2Q96MH2 286 aaKnown RBP13.96□□□□□ -0.17
COMMD4-214ENST00000566230 BTBD1Q9H0C5 482 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 CLSTN2Q9H4D0 955 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 PLA2G4CQ9UP65 541 aa13.96□□□□□ -0.17
COMMD4-214ENST00000566230 MGAQ8IWI9 3026 aa13.96□□□□□ -0.18
COMMD4-214ENST00000566230 E9PAM4 449 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 CBX4O00257 560 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 TULP2O00295 520 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 PLK4O00444 970 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 BIN1O00499 593 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 STX10O60499 249 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 EPB41P11171 864 aaKnown RBP13.95□□□□□ -0.18
COMMD4-214ENST00000566230 RAD23BP54727 409 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 CLDN6P56747 220 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 ZBTB16Q05516 673 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 PDE4CQ08493 712 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 PRAMEF14Q5SWL7 426 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 TMPRSS12Q86WS5 348 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.95□□□□□ -0.18
COMMD4-214ENST00000566230 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 PIP4K2CQ8TBX8 421 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 WFIKKN2Q8TEU8 576 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 IMPG2Q9BZV3 1241 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 MTG2Q9H4K7 406 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 ABCB8Q9NUT2 735 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 STOML2Q9UJZ1 356 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 DOCK9Q9BZ29 2069 aa13.95□□□□□ -0.18
COMMD4-214ENST00000566230 A0A1B0GTQ1 180 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 C1QL1O75973 258 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 ZBED1O96006 694 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 PABPC1P11940 636 aaKnown RBP13.94□□□□□ -0.18
COMMD4-214ENST00000566230 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
COMMD4-214ENST00000566230 GTF2H1P32780 548 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 ABCG1P45844 678 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 SGSHP51688 502 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 TKTL1P51854 596 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 BCAT1P54687 386 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 SHBQ15464 509 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 ARHGAP17Q68EM7 881 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 KIAA0895LQ68EN5 471 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 GATAD2AQ86YP4 633 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 WFDC5Q8TCV5 224 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 SEMA4DQ92854 862 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 TMA16Q96EY4 203 aaKnown RBP13.94□□□□□ -0.18
COMMD4-214ENST00000566230 CEP63Q96MT8 703 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 UBL7Q96S82 380 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-214ENST00000566230 ULBP1Q9BZM6 244 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 FBRSQ9HAH7 460 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 SGK2Q9HBY8 427 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 METTL14Q9HCE5 456 aaKnown RBP13.94□□□□□ -0.18
COMMD4-214ENST00000566230 SFMBT1Q9UHJ3 866 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
COMMD4-214ENST00000566230 VILLO15195 856 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 SLC16A3O15427 465 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 TLX3O43711 291 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 DFNA5O60443 496 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 DNTTP04053 509 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 WNT1P04628 370 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 DLDP09622 509 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 CD70P32970 193 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 HARS2P49590 506 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 RACK1P63244 317 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 CT47A1Q5JQC4 288 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 ADGRF1Q5T601 910 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
COMMD4-214ENST00000566230 ANKRD52Q8NB46 1076 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
COMMD4-214ENST00000566230 EDEM1Q92611 657 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms