RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 BRI3BPQ8WY22 251 aa4.7□□□□□ -1.66
LINC00561-201ENST00000565815 TFAP2BQ92481 460 aa4.7□□□□□ -1.66
LINC00561-201ENST00000565815 PTCD3Q96EY7 689 aaKnown RBP4.7□□□□□ -1.66
LINC00561-201ENST00000565815 TMEM41AQ96HV5 264 aa4.7□□□□□ -1.66
LINC00561-201ENST00000565815 MAGEB5Q9BZ81 275 aa4.7□□□□□ -1.66
LINC00561-201ENST00000565815 SLC45A1Q9Y2W3 748 aa4.7□□□□□ -1.66
LINC00561-201ENST00000565815 CCL15-CCL14A0A0B4J2E2 113 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 RGS10O43665 173 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CHRM2P08172 466 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 ITPKBP27987 946 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CD6P30203 668 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 TECP42680 631 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 PPIL2Q13356 520 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CCL15Q16663 113 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 TWISTNBQ3B726 338 aaPredicted RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 LAYNQ6UX15 382 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CLNKQ7Z7G1 428 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 ERO1BQ86YB8 467 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CACNA2D3Q8IZS8 1091 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CCDC191Q8NCU4 936 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 TOR1AIP2Q8NFQ8 470 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 SLC25A43Q8WUT9 341 aaPredicted RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CELF1Q92879 486 aaKnown RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 C17orf80Q9BSJ5 609 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 COLEC11Q9BWP8 271 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 SLC25A32Q9H2D1 315 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 PADI4Q9UM07 663 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 ATXN1LP0C7T5 689 aaKnown RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 EGR1P18146 543 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 VAV2P52735 878 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 PRKAA2P54646 552 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 MGAT5BQ3V5L5 792 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 FKBP1CQ5VVH2 108 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 MICALCLQ6ZW33 695 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 MOB2Q70IA6 237 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 MCM10Q7L590 875 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 R3HDM4Q96D70 268 aa4.69□□□□□ -1.66
LINC00561-201ENST00000565815 PRR11Q96HE9 360 aaPredicted RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
LINC00561-201ENST00000565815 A0A1W2PS29 197 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DYNC1I1O14576 645 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 TFRCP02786 760 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 THP07101 528 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 ELFN1P0C7U0 828 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 RPS7P62081 194 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 TTLL5Q6EMB2 1281 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 C17orf99Q6UX52 265 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 RNF207Q6ZRF8 634 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 FAM109AQ8N4B1 249 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 U2AF1L4Q8WU68 220 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 CACTINQ8WUQ7 758 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 CCT6BQ92526 530 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 GLG1Q92896 1179 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 OPTNQ96CV9 577 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 WDYHV1Q96HA8 205 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 HAPLN3Q96S86 360 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DCLRE1CQ96SD1 692 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 PARK7Q99497 189 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 MRIQ9BWK5 157 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 REXO4Q9GZR2 422 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 MSL2Q9HCI7 577 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DKK2Q9UBU2 259 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DBF4Q9UBU7 674 aaPredicted RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 TSPYL4Q9UJ04 414 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 ASTN2O75129 1339 aaPredicted RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 RPAP1Q9BWH6 1393 aaPredicted RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 TRGV11A0A075B6L2 103 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 FCHO1O14526 889 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 MGST3O14880 152 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DDX58O95786 925 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 TPM3P06753 285 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 RPL17P18621 184 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 HTR7P34969 479 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 CCT4P50991 539 aaKnown RBP4.68□□□□□ -1.66
LINC00561-201ENST00000565815 PPATQ06203 517 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DLK2Q6UY11 383 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 SLC15A3Q8IY34 581 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 YAF2Q8IY57 180 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 SCAMP5Q8TAC9 235 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 CSGALNACT1Q8TDX6 532 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 PTDSS2Q9BVG9 487 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 NRDE2Q9H7Z3 1164 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 DACT1Q9NYF0 836 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 VPS51Q9UID3 782 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 SCN9AQ15858 1988 aa4.68□□□□□ -1.66
LINC00561-201ENST00000565815 ZAR1LA6NP61 321 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 TISP43B9A030 160 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 B9A039 149 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 CXCL11O14625 94 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 DNPH1O43598 174 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 CSTBP04080 98 aaKnown RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 AKT1P31749 480 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 IGHMBP2P38935 993 aaKnown RBP4.67□□□□□ -1.66
LINC00561-201ENST00000565815 ADAM17P78536 824 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 ICA1Q05084 483 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 CUL4AQ13619 759 aa4.67□□□□□ -1.66
LINC00561-201ENST00000565815 ZSCAN23Q3MJ62 389 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms