RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 LRSAM1Q6UWE0 723 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 MMS22LQ6ZRQ5 1243 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 KIAA0907Q7Z7F0 614 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 TMEM110Q86TL2 294 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CHSY1Q86X52 802 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 PASD1Q8IV76 773 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 DHX40Q8IX18 779 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 ATP6V0D2Q8N8Y2 350 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 HJURPQ8NCD3 748 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 DQX1Q8TE96 717 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 SETD7Q8WTS6 366 aaKnown RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 STK32AQ8WU08 396 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 DNASE2BQ8WZ79 361 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 PPP1R13BQ96KQ4 1090 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CAMK1GQ96NX5 476 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SCNM1Q9BWG6 230 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 IRX2Q9BZI1 471 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 BTBD1Q9H0C5 482 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TMEM245Q9H330 911 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 MTG2Q9H4K7 406 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SYNCQ9H7C4 482 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 POPDC2Q9HBU9 364 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CAPN10Q9HC96 672 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 PRSS16Q9NQE7 514 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.65□□□□□ -1.34
TCF4-228ENST00000565393 KIAA1522Q9P206 1035 aaPredicted RBP6.65□□□□□ -1.34
TCF4-228ENST00000565393 DNAJC12Q9UKB3 198 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 CNTN6Q9UQ52 1028 aa6.65□□□□□ -1.34
TCF4-228ENST00000565393 TTC34A8MYJ7 566 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 KCNU1A8MYU2 1149 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 UPK3BL1B0FP48 263 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 UPK3BL2E5RIL1 263 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 FOXN3O00409 490 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 KCNK3O14649 394 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PAPSS1O43252 624 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 GRAP2O75791 330 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 RNASEH2AO75792 299 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 TRUB2O95900 331 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 ASLP04424 464 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 SLC2A3P11169 496 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 CD59P13987 128 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 TACR2P21452 398 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 SLC8A1P32418 973 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 CSKP41240 450 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 RPL34P49207 117 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 CSNK1EP49674 416 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 NUMBP49757 651 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 BPIFB4P59827 614 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 RNASE9P60153 205 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 ECT2LQ008S8 904 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 ZBTB16Q05516 673 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 HNRNPDQ14103 355 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 SUZ12Q15022 739 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 TEAD4Q15561 434 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PTPRNQ16849 979 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 HLA-BQ31612 363 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 ACCSLQ4AC99 568 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 HSP90AA4PQ58FG1 418 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 FAM133BQ5BKY9 247 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 FSCBQ5H9T9 825 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PITRM1Q5JRX3 1037 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PEAR1Q5VY43 1037 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 ZNF776Q68DI1 518 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 C11orf57Q6ZUT1 292 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 PIP4P1Q86T03 277 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 TAC4Q86UU9 113 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 MMAAQ8IVH4 418 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 FAM114A1Q8IWE2 563 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 APCDD1Q8J025 514 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 DEFB106AQ8N104 65 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 CHCHD4Q8N4Q1 142 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 ZCCHC9Q8N567 271 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 WDTC1Q8N5D0 677 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.64□□□□□ -1.35
TCF4-228ENST00000565393 WFDC5Q8TCV5 224 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 RHBDD1Q8TEB9 315 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 MYEOVQ96EZ4 313 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 SLC39A13Q96H72 371 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 BTN2A3PQ96KV6 586 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 FCRL2Q96LA5 508 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 NOX5Q96PH1 765 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 PPP1R9BQ96SB3 815 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 OMDQ99983 421 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 ZDHHC5Q9C0B5 715 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 SIK2Q9H0K1 926 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 NUCKS1Q9H1E3 243 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 NEUROG2Q9H2A3 272 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 NDST4Q9H3R1 872 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 C6orf106Q9H6K1 298 aaPredicted RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 GAREM1Q9H706 876 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 FAM204AQ9H8W3 233 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 SGK2Q9HBY8 427 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 DNAAF2Q9NVR5 837 aaKnown RBP6.64□□□□□ -1.35
TCF4-228ENST00000565393 DDIT4Q9NX09 232 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 FBXL12Q9NXK8 326 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 APEX2Q9UBZ4 518 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 CYTH4Q9UIA0 394 aa6.64□□□□□ -1.35
TCF4-228ENST00000565393 XPO7Q9UIA9 1087 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms