RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ITM2CQ9NQX7 267 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 WSB2Q9NYS7 404 aaPredicted RBP10.41□□□□□ -0.74
CMTM3-209ENST00000565003 STIM2Q9P246 746 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 DNAJC12Q9UKB3 198 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 PLA2G4CQ9UP65 541 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 LAMA1P25391 3075 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 ACACBO00763 2458 aa10.41□□□□□ -0.74
CMTM3-209ENST00000565003 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 TRUB2O95900 331 aaKnown RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 IGLV3-19P01714 112 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 ERBB2P04626 1255 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 DLDP09622 509 aaKnown RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 MAOBP27338 520 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 ERCC5P28715 1186 aaPredicted RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 CLCN1P35523 988 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 EIF4EBP2Q13542 120 aaPredicted RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 E2F5Q15329 346 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 DUOXA1Q1HG43 343 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 DCAF6Q58WW2 860 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 ZC3H12AQ5D1E8 599 aaKnown RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 FSCBQ5H9T9 825 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 SH3PXD2AQ5TCZ1 1133 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 MMS22LQ6ZRQ5 1243 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 SLC47A2Q86VL8 602 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 FAM114A1Q8IWE2 563 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 CFAP52Q8N1V2 620 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 OR2I1PQ8NGU4 316 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 OR2T3Q8NH03 318 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 FIBINQ8TAL6 211 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 CEP76Q8TAP6 659 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 MYO19Q96H55 970 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 PPP1R13BQ96KQ4 1090 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 SLC2A13Q96QE2 648 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 DDX50Q9BQ39 737 aaKnown RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 TUBGCP2Q9BSJ2 902 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 TRIM62Q9BVG3 475 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 GPR174Q9BXC1 333 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 MTG2Q9H4K7 406 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 PLCB1Q9NQ66 1216 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 INTS6Q9UL03 887 aaKnown RBP10.4□□□□□ -0.74
CMTM3-209ENST00000565003 SLC6A14Q9UN76 642 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 ADAMTS9Q9P2N4 1935 aa10.4□□□□□ -0.74
CMTM3-209ENST00000565003 NUMA1Q14980 2115 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 TYW5A2RUC4 315 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 MEI4A8MW99 385 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 GRAP2O75791 330 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 APOEP02649 317 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 ATP5BP06576 529 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 C7P10643 843 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 POLR2EP19388 210 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CSRP1P21291 193 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 TACR2P21452 398 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CSKP41240 450 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 PTK2Q05397 1052 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 GFPT1Q06210 699 aaPredicted RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 KCNMA1Q12791 1236 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CDH18Q13634 790 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 KCNJ12Q14500 433 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 PTPN20Q4JDL3 420 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 RAP1GAP2Q684P5 730 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 OLFML1Q6UWY5 402 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CLEC17AQ6ZS10 378 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 FAM183BPQ6ZVS7 135 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 RABEPKQ7Z6M1 372 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 FAM124AQ86V42 546 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CHSY1Q86X52 802 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 FAM71AQ8IYT1 594 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 RGL4Q8IZJ4 473 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 LGI2Q8N0V4 545 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 DEFB106AQ8N104 65 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CARNMT1Q8N4J0 409 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 ZNF557Q8N988 423 aaPredicted RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 TTC17Q96AE7 1141 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 BTN2A3PQ96KV6 586 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 GTPBP2Q9BX10 602 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 LHX5Q9H2C1 402 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 FAM204AQ9H8W3 233 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 PRSS16Q9NQE7 514 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
CMTM3-209ENST00000565003 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 DDIT4Q9NX09 232 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 FHOD1Q9Y613 1164 aa10.39□□□□□ -0.75
CMTM3-209ENST00000565003 CACNA1EQ15878 2313 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 SYNJ2BP-COX16A0A087WUM0 186 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 FAM170AA1A519 330 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 KCNU1A8MYU2 1149 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 HSF2BPO75031 334 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 LUC7L3O95232 432 aaKnown RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 GLI1P08151 1106 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ACADMP11310 421 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 CEACAM1P13688 526 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 OXTRP30559 389 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ANP32AP39687 249 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms