RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-206	ENST00000564934	SCML2	Q9UQR0	700 aa		13.6	□□□□□ -0.23
RPAP1-206	ENST00000564934	PCDHGA8	Q9Y5G5	932 aa		13.6	□□□□□ -0.23
RPAP1-206	ENST00000564934	ITPR2	Q14571	2701 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	LZTS3	O60299	673 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	GJB6	O95452	261 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	CCDC130	P13994	396 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	DGKA	P23743	735 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	HOXD9	P28356	352 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	DUSP3	P51452	185 aa	Predicted RBP	13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	PPP2CB	P62714	309 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	PPP2CA	P67775	309 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	FOXK1	P85037	733 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	EHHADH	Q08426	723 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	NAPEPLD	Q6IQ20	393 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	CLEC14A	Q86T13	490 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	ADIPOR2	Q86V24	386 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	CBWD2	Q8IUF1	395 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	SYCP3	Q8IZU3	236 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	WFIKKN2	Q8TEU8	576 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	JAKMIP2	Q96AA8	810 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	OMD	Q99983	421 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	SLC25A18	Q9H1K4	315 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	SMYD3	Q9H7B4	428 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	ABCB8	Q9NUT2	735 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	RASAL2	Q9UJF2	1139 aa		13.59	□□□□□ -0.23
RPAP1-206	ENST00000564934	RNASEH1	O60930	286 aa	Known RBP	13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	TNFSF15	O95150	251 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	GCNT3	O95395	438 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	DLD	P09622	509 aa	Known RBP	13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	CASP5	P51878	434 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	ADPRH	P54922	357 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	PDE4C	Q08493	712 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	SFSWAP	Q12872	951 aa	Known RBP	13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	SRSF6	Q13247	344 aa	Known RBP	13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	CST6	Q15828	149 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	TADA2B	Q86TJ2	420 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	WDR49	Q8IV35	697 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	CPXM2	Q8N436	756 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	ARL14	Q8N4G2	192 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	RASSF8	Q8NHQ8	419 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	SLC2A14	Q8TDB8	520 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	APOLD1	Q96LR9	279 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	DCLK3	Q9C098	648 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	LRRC4C	Q9HCJ2	640 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	CSNK1G1	Q9HCP0	422 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	SUN2	Q9UH99	717 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	GGA2	Q9UJY4	613 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	NAGPA	Q9UK23	515 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	FZD4	Q9ULV1	537 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	ENTPD2	Q9Y5L3	495 aa		13.58	□□□□□ -0.24
RPAP1-206	ENST00000564934	KIF26B	Q2KJY2	2108 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	LY6G6E	A0A0G2JKS1	128 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	SLC26A4	O43511	780 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	LAT	O43561	262 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	SIN3B	O75182	1162 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	THEGL	P0DJG4	465 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	TGM2	P21980	687 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	ANP32A	P39687	249 aa	Known RBP	13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	COG7	P83436	770 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	EFEMP1	Q12805	493 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	SKIDA1	Q1XH10	827 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	MBLAC2	Q68D91	279 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	ACOT1	Q86TX2	421 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	IQCH	Q86VS3	1027 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	PTRH1	Q86Y79	214 aa	Known RBP	13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	AHI1	Q8N157	1196 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	OR14C36	Q8NHC7	312 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	IFI44	Q8TCB0	444 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	LARP4B	Q92615	738 aa	Known RBP	13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	TNIP3	Q96KP6	325 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	TPX2	Q9ULW0	747 aa	Known RBP	13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934		U3KQA8	63 aa		13.57	□□□□□ -0.24
RPAP1-206	ENST00000564934	ZNF233	A6NK53	670 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	MAGEC1	O60732	1142 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	ATP5B	P06576	529 aa	Known RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	GIMD1	P0DJR0	217 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	DLAT	P10515	647 aa	Known RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	PABPC1	P11940	636 aa	Known RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	UBA7	P41226	1012 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	MYL6	P60660	151 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	OVGP1	Q12889	678 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	SURF1	Q15526	300 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	TGIF1	Q15583	401 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	TBR1	Q16650	682 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	SCD5	Q86SK9	330 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	MMAA	Q8IVH4	418 aa	Known RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	FAM217A	Q8IXS0	508 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	AADAT	Q8N5Z0	425 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	ARRDC3	Q96B67	414 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	GRAMD1A	Q96CP6	724 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	LIN37	Q96GY3	246 aa	Predicted RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	AK8	Q96MA6	479 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	FGFBP2	Q9BYJ0	223 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	CAAP1	Q9H8G2	361 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	FAM49B	Q9NUQ9	324 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	PCDHA5	Q9Y5H7	936 aa		13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.56	□□□□□ -0.24
RPAP1-206	ENST00000564934	TBC1D3D	A0A087WVF3	549 aa		13.55	□□□□□ -0.24
RPAP1-206	ENST00000564934	TBC1D3I	A0A087WXS9	549 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms