RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 KPNA1P52294 538 aaPredicted RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 MLLT6P55198 1093 aaPredicted RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 MTA1Q13330 715 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 MANEALQ5VSG8 457 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 ANKRD22Q5VYY1 191 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 TADA2BQ86TJ2 420 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CCDC110Q8TBZ0 833 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CLP1Q92989 425 aaKnown RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 ARL8AQ96BM9 186 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 TBC1D31Q96DN5 1066 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 CATSPERBQ9H7T0 1116 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 TMBIM4Q9HC24 238 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 XPO7Q9UIA9 1087 aaKnown RBP20.16■□□□□ 0.82
CLN6-205ENST00000564846 NEU3Q9UQ49 428 aa20.16■□□□□ 0.82
CLN6-205ENST00000564846 EIF3HO15372 352 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLN6-205ENST00000564846 TLR5O60602 858 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 TBX18O95935 607 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 VAV1P15498 845 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 MAGEA4P43358 317 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 ARL4CP56559 192 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 AP1B1Q10567 949 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 KCNJ11Q14654 390 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 TTMPQ5BVD1 217 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 TMEM240Q5SV17 173 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 ACBD5Q5T8D3 534 aaPredicted RBP20.15■□□□□ 0.82
CLN6-205ENST00000564846 RWDD4Q6NW29 188 aaKnown RBP20.15■□□□□ 0.82
CLN6-205ENST00000564846 PPP1R21Q6ZMI0 780 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 TAB3Q8N5C8 712 aaPredicted RBP20.15■□□□□ 0.82
CLN6-205ENST00000564846 CCDC33Q8N5R6 958 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 CCNYQ8ND76 341 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 LRRN4Q8WUT4 740 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 MYRFLQ96LU7 910 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 TTC25Q96NG3 672 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 FRMD8Q9BZ67 464 aaPredicted RBP20.15■□□□□ 0.82
CLN6-205ENST00000564846 SAYSD1Q9NPB0 183 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 NINJ2Q9NZG7 142 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 YIPF1Q9Y548 306 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 HS3ST4Q9Y661 456 aa20.15■□□□□ 0.82
CLN6-205ENST00000564846 A0A0A0MRY4 1105 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 TMEM63AO94886 807 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 MOCS2O96007 188 aaPredicted RBP20.14■□□□□ 0.81
CLN6-205ENST00000564846 SHBGP04278 402 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 DNAJB2P25686 324 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 ELF1P32519 619 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 MAGEA6P43360 314 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 RING1Q06587 406 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 GALNT2Q10471 571 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 VEPH1Q14D04 833 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 KYNUQ16719 465 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 NPWQ8N729 165 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 ATP6V0D2Q8N8Y2 350 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 P2RY11Q96G91 374 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 ZNF512Q96ME7 567 aaPredicted RBP20.14■□□□□ 0.81
CLN6-205ENST00000564846 SPATA13Q96N96 652 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 TMEM109Q9BVC6 243 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 RXFP1Q9HBX9 757 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 GREB1Q4ZG55 1949 aa20.14■□□□□ 0.81
CLN6-205ENST00000564846 HMGB1P1B2RPK0 211 aaPredicted RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 ALOX15BO15296 676 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 MTSS1O43312 755 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 LILRB3O75022 631 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ACSL3O95573 720 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 IGLV3-27P01718 113 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 CTSAP10619 480 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 HMGA1P17096 107 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 PPIDQ08752 370 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 KRT71Q3SY84 523 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ARHGEF18Q6ZSZ5 1173 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 MIB1Q86YT6 1006 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 TCEAL8Q8IYN2 117 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 PDIK1LQ8N165 341 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 LZTR1Q8N653 840 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 PHOSPHO2Q8TCD6 241 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 HDAC11Q96DB2 347 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 TRMT2BQ96GJ1 504 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 BTN2A3PQ96KV6 586 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ATP6V1G3Q96LB4 118 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 RAD9AQ99638 391 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ZBP1Q9H171 429 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 CXXC1Q9P0U4 656 aaPredicted RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 PTPRSQ13332 1948 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 TCRBV7S3A2A0A539 114 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 SLC12A8A0AV02 714 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 E9PAM4 449 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 GOLGA8MH3BSY2 632 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 OPHN1O60890 802 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ANKRD20A2Q5SQ80 823 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 UBAP2Q5T6F2 1119 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 ANKRD20A1Q5TYW2 823 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ANKRD20A3Q5VUR7 823 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 HERC6Q8IVU3 1022 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 C7orf61Q8IZ16 206 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 HERVK_113Q902F9 699 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms